RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MYMKA6NI61 221 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 IL18RAPO95256 599 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 F11P03951 625 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 POLR2BP30876 1174 aaKnown RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 CNR2P34972 360 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 PXNP49023 591 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 TFAMQ00059 246 aaKnown RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 SMARCB1Q12824 385 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 TXNDC8Q6A555 127 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 PRR23CQ6ZRP0 262 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 CEP68Q76N32 757 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 DCP1BQ8IZD4 617 aaKnown RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 FAM160A2Q8N612 972 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 RIN3Q8TB24 985 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 USP13Q92995 863 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 HVCN1Q96D96 273 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 CHFRQ96EP1 664 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 ZNF560Q96MR9 790 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 FAM83CQ9BQN1 747 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 STRA6Q9BX79 667 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 EBF3Q9H4W6 596 aa19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 MAGED2Q9UNF1 606 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-206ENST00000531405 GDF9O60383 454 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 LRP3O75074 770 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 PRPF40AO75400 957 aaKnown RBP19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 ITGB3P05106 788 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 ACAT1P24752 427 aaKnown RBP19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 AVPR1AP37288 418 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 PTPAQ15257 358 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 CCDC142Q17RM4 750 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 FSTL4Q6MZW2 842 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 WDR5BQ86VZ2 330 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 SYNPOQ8N3V7 929 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 PDCL2Q8N4E4 241 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 DNAJC19Q96DA6 116 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 CLIC6Q96NY7 704 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 FBXO2Q9UK22 296 aaPredicted RBP19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 L1RE1Q9UN81 338 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 AGAP1Q9UPQ3 857 aa19.84■□□□□ 0.77
SSSCA1-206ENST00000531405 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 ARSAP15289 507 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 CASP5P51878 434 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 TSPY1Q01534 308 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 POU5F1Q01860 360 aaKnown RBP19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 BFSP1Q12934 665 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 RUNX3Q13761 415 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 POSTNQ15063 836 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 CSRP2Q16527 193 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 DDR2Q16832 855 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 L1TD1Q5T7N2 865 aaKnown RBP19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 NT5DC4Q86YG4 428 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 BRSK2Q8IWQ3 736 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 C1orf127Q8N9H9 656 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 NETO1Q8TDF5 533 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 FGFBP2Q9BYJ0 223 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 TDP1Q9NUW8 608 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 POLR3BQ9NW08 1133 aaPredicted RBP19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 STK17AQ9UEE5 414 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 CCDC39Q9UFE4 941 aa19.83■□□□□ 0.77
SSSCA1-206ENST00000531405 NUP205Q92621 2012 aa19.83■□□□□ 0.76
SSSCA1-206ENST00000531405 SLC30A4O14863 429 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 HCRTO43612 131 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 TADA3O75528 432 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 GCNT3O95395 438 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 CYP2F1P24903 491 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 PNPLA4P41247 253 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 TMEM196Q5HYL7 178 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 RRAGBQ5VZM2 374 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 NAIF1Q69YI7 327 aaPredicted RBP19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 FAM173BQ6P4H8 233 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 NOC3LQ8WTT2 800 aaKnown RBP19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 ACCSQ96QU6 501 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 DDX43Q9NXZ2 648 aaKnown RBP19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 RBAKQ9NYW8 714 aaPredicted RBP19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 SEL1LQ9UBV2 794 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 MYOFQ9NZM1 2061 aa19.82■□□□□ 0.76
SSSCA1-206ENST00000531405 EGFP01133 1207 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 GAP43P17677 238 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 DDX6P26196 483 aaKnown RBP eCLIP19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 HOXA6P31267 233 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 CEBPZQ03701 1054 aaKnown RBP19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 CCDC6Q16204 474 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 NFE2Q16621 373 aaPredicted RBP19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 PPM1JQ5JR12 505 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 SV2BQ7L1I2 683 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 OSTM1Q86WC4 334 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 TTC16Q8NEE8 873 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 CXorf38Q8TB03 319 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 MRPS31Q92665 395 aaKnown RBP19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 FBRSL1Q9HCM7 1045 aaKnown RBP19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 ZMYM5Q9UJ78 669 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 GTF3C4Q9UKN8 822 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 EXOC7Q9UPT5 735 aa19.81■□□□□ 0.76
SSSCA1-206ENST00000531405 TRDMT1O14717 391 aaKnown RBP19.8■□□□□ 0.76
SSSCA1-206ENST00000531405 AXIN1O15169 862 aa19.8■□□□□ 0.76
SSSCA1-206ENST00000531405 HUS1O60921 280 aa19.8■□□□□ 0.76
SSSCA1-206ENST00000531405 KRT19P08727 400 aa19.8■□□□□ 0.76
SSSCA1-206ENST00000531405 CSH1P0DML2 217 aa19.8■□□□□ 0.76
SSSCA1-206ENST00000531405 CSH2P0DML3 217 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms