RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CD207Q9UJ71 328 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
CCS-206ENST00000530961 PRRG1O14668 218 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 DCXO43602 365 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 C8AP07357 584 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 PDGFRBP09619 1106 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 HNRNPA1P09651 372 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCS-206ENST00000530961 ACAT1P24752 427 aaKnown RBP16.32■□□□□ 0.2
CCS-206ENST00000530961 YWHAEP62258 255 aaKnown RBP16.32■□□□□ 0.2
CCS-206ENST00000530961 TPM4P67936 248 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 INCA1Q0VD86 236 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 CUL2Q13617 745 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 IQCB1Q15051 598 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 KRT31Q15323 416 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 SLC39A12Q504Y0 691 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 PRRC2BQ5JSZ5 2229 aaKnown RBP16.32■□□□□ 0.2
CCS-206ENST00000530961 PPM1LQ5SGD2 360 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 CES5AQ6NT32 575 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 LRRTM3Q86VH5 581 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 SMRP1Q8NCR6 262 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 FAM81BQ96LP2 452 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 SYT15Q9BQS2 421 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 INTS2Q9H0H0 1204 aaKnown RBP16.32■□□□□ 0.2
CCS-206ENST00000530961 SDCBP2Q9H190 292 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 S1PR5Q9H228 398 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 HSD3B7Q9H2F3 369 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 CBX8Q9HC52 389 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 LIMA1Q9UHB6 759 aaKnown RBP16.32■□□□□ 0.2
CCS-206ENST00000530961 TRANK1O15050 2925 aa16.32■□□□□ 0.2
CCS-206ENST00000530961 MTMR11A4FU01 709 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
CCS-206ENST00000530961 POU2F2P09086 479 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
CCS-206ENST00000530961 RAP1GAPP47736 663 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 TUFMP49411 452 aaKnown RBP16.31■□□□□ 0.2
CCS-206ENST00000530961 GCNT1Q02742 428 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 SMAD4Q13485 552 aaKnown RBP16.31■□□□□ 0.2
CCS-206ENST00000530961 LRSAM1Q6UWE0 723 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 CRYBG2Q8N1P7 616 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 ATAD1Q8NBU5 361 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 SLC7A14Q8TBB6 771 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 FAM200AQ8TCP9 573 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 SPPL2BQ8TCT7 592 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 FUBP3Q96I24 572 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCS-206ENST00000530961 PGLYRP2Q96PD5 576 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 PRRX2Q99811 253 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 NT5C1AQ9BXI3 368 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 ABCB6Q9NP58 842 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 TAB2Q9NYJ8 693 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 GTF3C4Q9UKN8 822 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 PCDHB5Q9Y5E4 795 aa16.31■□□□□ 0.2
CCS-206ENST00000530961 ZFHX2Q9C0A1 2572 aaPredicted RBP16.31■□□□□ 0.2
CCS-206ENST00000530961 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 MYBPHLA2RUH7 354 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 CILPO75339 1184 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 SEC24AO95486 1093 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 NDST1P52848 882 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 LRMPQ12912 555 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 DUSP4Q13115 394 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 PLD1Q13393 1074 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 ATAT1Q5SQI0 421 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 FKBP15Q5T1M5 1219 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 SMYD5Q6GMV2 418 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 GPR149Q86SP6 731 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
CCS-206ENST00000530961 PPM1KQ8N3J5 372 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 C12orf76Q8N812 135 aaPredicted RBP16.3■□□□□ 0.2
CCS-206ENST00000530961 B3GALNT2Q8NCR0 500 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 CRACR2AQ9BSW2 395 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 PRKD2Q9BZL6 878 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 TSPY26PQ9H489 355 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 NME7Q9Y5B8 376 aa16.3■□□□□ 0.2
CCS-206ENST00000530961 GOLGA6L19H0YKK7 550 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 HCRTO43612 131 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 ATP2C2O75185 946 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 XYLBO75191 536 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 RFPL2O75678 378 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 VNN2O95498 520 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 LRG1P02750 347 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 CD58P19256 250 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 PON1P27169 355 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 ALDH1A3P47895 512 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 COPB1P53618 953 aaKnown RBP16.29■□□□□ 0.2
CCS-206ENST00000530961 ZNF445P59923 1031 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 PSMC1P62191 440 aaKnown RBP16.29■□□□□ 0.2
CCS-206ENST00000530961 RARS2Q5T160 578 aaKnown RBP16.29■□□□□ 0.2
CCS-206ENST00000530961 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms