RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 TECPR2O15040 1411 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 TRPC5OSA6NMA1 111 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 HNRNPRO43390 633 aaKnown RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 AKAP10O43572 662 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 APOA4P06727 396 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 KCNK10P57789 538 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 ACBD5Q5T8D3 534 aaPredicted RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 LVRNQ6Q4G3 990 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 MPZL3Q6UWV2 235 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 ADCK2Q7Z695 626 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 TMCO5AQ8N6Q1 288 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 C1orf131Q8NDD1 294 aaKnown RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 ERGIC2Q96RQ1 377 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 KCNK16Q96T55 309 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 ADNPQ9H2P0 1102 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 ARHGEF9O43307 516 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CARSP49589 748 aaKnown RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 R3HDM1Q15032 1099 aaKnown RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 HORMAD1Q86X24 394 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CGRRF1Q99675 332 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 FAM118BQ9BPY3 351 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 DEFB129Q9H1M3 183 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 SCUBE2Q9NQ36 999 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 GIMAP4Q9NUV9 329 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CEMIPQ8WUJ3 1361 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 SUPT20HL2P0C7V6 817 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 STAG3L1P0CL83 205 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 PON1P27169 355 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 FNTAP49354 379 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 DMC1Q14565 340 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 COBLL1Q53SF7 1204 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 TIGD7Q6NT04 549 aaPredicted RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 SEC16BQ96JE7 1060 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 GPR63Q9BZJ6 419 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.83□□□□□ -1
CTNND1-227ENST00000530748 SLC25A13Q9UJS0 675 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 NAGPAQ9UK23 515 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CEP170BQ9Y4F5 1589 aaPredicted RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 C16orf96A6NNT2 1141 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 MYO1GB0I1T2 1018 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 H0Y626 953 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 SGPL1O95470 568 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CAP2P40123 477 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 ACTN3Q08043 901 aaPredicted RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 TWF1Q12792 350 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CNGA3Q16281 694 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 INTS5Q6P9B9 1019 aaKnown RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 SETD3Q86TU7 594 aaPredicted RBP8.83□□□□□ -1
CTNND1-227ENST00000530748 OTULINQ96BN8 352 aa8.83□□□□□ -1
CTNND1-227ENST00000530748 CCDC78A2IDD5 438 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CST8O60676 142 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CYP11B2P19099 503 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 PDK2Q15119 407 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CHI3L2Q15782 390 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 HIST2H2ACQ16777 129 aaPredicted RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 HIST2H2AA3Q6FI13 130 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CHSY1Q86X52 802 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 ERP44Q9BS26 406 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 FAM167BQ9BTA0 163 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 WDCPQ9H6R7 721 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 PSD3Q9NYI0 1048 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 SMARCAL1Q9NZC9 954 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 DOLKQ9UPQ8 538 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 FAM32AQ9Y421 112 aaKnown RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 CDY2AQ9Y6F7 541 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CDY1Q9Y6F8 540 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CFAP99D6REC4 459 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 KRT8P05787 483 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 VDRP11473 427 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 PTGER2P43116 358 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CTCFP49711 727 aaPredicted RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 GRIN1Q05586 938 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 CCDC15Q0P6D6 951 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 E2F4Q16254 413 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 DENND5BQ6ZUT9 1274 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 USP13Q92995 863 aaPredicted RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 THAP2Q9H0W7 228 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 GGT7Q9UJ14 662 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 DSEQ9UL01 958 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 PPP2R3BQ9Y5P8 575 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 ALG6Q9Y672 507 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 E2F8A0AVK6 867 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 RASSF10A6NK89 507 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 ANKRD65E5RJM6 399 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 ZC3H11AO75152 810 aaKnown RBP eCLIP8.82□□□□□ -1
CTNND1-227ENST00000530748 ENO3P13929 434 aaPredicted RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 SLC11A2P49281 568 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 PLEKHH3Q7Z736 793 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 PRPF39Q86UA1 669 aaKnown RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 COL23A1Q86Y22 540 aaPredicted RBP8.82□□□□□ -1
CTNND1-227ENST00000530748 SERPINB12Q96P63 405 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 DNAJC7Q99615 494 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 APOL5Q9BWW9 433 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 YIPF3Q9GZM5 350 aa8.82□□□□□ -1
CTNND1-227ENST00000530748 AGLP35573 1532 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms