RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 ZNF606Q8WXB4 792 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
SOX6-213ENST00000530378 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TTPALQ9BTX7 342 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 AAASQ9NRG9 546 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TAS2R14Q9NYV8 317 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 PCDHGC5Q9Y5F6 944 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 ATG2AQ2TAZ0 1938 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 A0A0U1RQJ8 604 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 M0QYV0 167 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.6
SOX6-213ENST00000530378 GABRDO14764 452 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 CYP11A1P05108 521 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 CCDC172P0C7W6 258 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TYMPP19971 482 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 FGFR3P22607 806 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 FECHP22830 423 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 LHX1P48742 406 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 CDR2Q01850 454 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 C2CD6Q53TS8 623 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 DENND1BQ6P3S1 775 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
SOX6-213ENST00000530378 UNC93AQ86WB7 457 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 SLC2A14Q8TDB8 520 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 ATRIPQ8WXE1 791 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 CLP1Q92989 425 aaKnown RBP11.32□□□□□ -0.6
SOX6-213ENST00000530378 PGLYRP2Q96PD5 576 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 MED10Q9BTT4 135 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TMLHEQ9NVH6 421 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 DSEQ9UL01 958 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 COL4A4P53420 1690 aaPredicted RBP11.32□□□□□ -0.6
SOX6-213ENST00000530378 O00370 1275 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 PIK3R2O00459 728 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 ZNF263O14978 683 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 SYN3O14994 580 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 ADAM12O43184 909 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 NRDCO43847 1150 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 MICAL2O94851 1124 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 PAEPP09466 180 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 CPB1P15086 417 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 PTPN1P18031 435 aaKnown RBP11.31□□□□□ -0.6
SOX6-213ENST00000530378 PPM1AP35813 382 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 BPIFB4P59827 614 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 ELAVL2Q12926 359 aaKnown RBP11.31□□□□□ -0.6
SOX6-213ENST00000530378 PSMD5Q16401 504 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 USP41Q3LFD5 358 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 SLC39A12Q504Y0 691 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
SOX6-213ENST00000530378 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 ZNF280DQ6N043 979 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 LRRTM3Q86VH5 581 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 TDHQ8IZJ6 230 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 THEM5Q8N1Q8 247 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 C1orf131Q8NDD1 294 aaKnown RBP11.31□□□□□ -0.6
SOX6-213ENST00000530378 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
SOX6-213ENST00000530378 SLC30A5Q8TAD4 765 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 MYLPFQ96A32 169 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 FAXDC2Q96IV6 333 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 SYT11Q9BT88 431 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 ZNF518BQ9C0D4 1074 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
SOX6-213ENST00000530378 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 TULP2O00295 520 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 NDUFA10O95299 355 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 SOD2P04179 222 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 URODP06132 367 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 VDRP11473 427 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 PCSK1P29120 753 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 BMPR1AP36894 532 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 GLUD2P49448 558 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 CDK17Q00537 523 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 TSPY1Q01534 308 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 TAP1Q03518 808 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 PPP2R2DQ66LE6 453 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 STKLD1Q8NE28 680 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 PCED1BQ96HM7 432 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 TNIP3Q96KP6 325 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 HERC2P3Q9BVR0 1158 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 PACSIN1Q9BY11 444 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 B3GNT5Q9BYG0 378 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 KRT82Q9NSB4 513 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 CHORDC1Q9UHD1 332 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 CDH9Q9ULB4 789 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 REXO2Q9Y3B8 237 aaKnown RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms