RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SPTLC1O15269 473 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 ARHGEF15O94989 841 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 CYP1A1P04798 512 aaPredicted RBP15.3■□□□□ 0.04
TTC39A-216ENST00000530004 UQCRHP07919 91 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 TAF6P49848 677 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 LILRA4P59901 499 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 GPC5P78333 572 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 RAB30Q15771 203 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 NAA35Q5VZE5 725 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 PAPD7Q5XG87 772 aaKnown RBP15.3■□□□□ 0.04
TTC39A-216ENST00000530004 TMEM173Q86WV6 379 aaPredicted RBP15.3■□□□□ 0.04
TTC39A-216ENST00000530004 PASD1Q8IV76 773 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 TPCN2Q8NHX9 752 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 SLC35G2Q8TBE7 412 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 CYFIP2Q96F07 1278 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 COLEC11Q9BWP8 271 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 AAASQ9NRG9 546 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 SNX9Q9Y5X1 595 aa15.3■□□□□ 0.04
TTC39A-216ENST00000530004 A0A1W2PPC1 479 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 CILPO75339 1184 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 AARSP49588 968 aaKnown RBP eCLIP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 RAD23BP54727 409 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 AMPD2Q01433 879 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 TUBB2AQ13885 445 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 CPA5Q8WXQ8 436 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 TWNKQ96RR1 684 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 OSGEPQ9NPF4 335 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 HMGXB4Q9UGU5 601 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 MSRAQ9UJ68 235 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 CDC23Q9UJX2 597 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 KPNA7A9QM74 516 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 FTCDO95954 541 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 PAEPP09466 180 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 NOMO3P69849 1222 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 CENPCQ03188 943 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 INCA1Q0VD86 236 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 ORC1Q13415 861 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 SV2CQ496J9 727 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 SLC39A11Q8N1S5 342 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 TTC39CQ8N584 583 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 SLC4A11Q8NBS3 891 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 TFAP2BQ92481 460 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 ZNF653Q96CK0 615 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 IGSF21Q96ID5 467 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 ZSWIM1Q9BR11 485 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 ELOVL4Q9GZR5 314 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 FAM124BQ9H5Z6 455 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 ADAM28Q9UKQ2 775 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 BARX2Q9UMQ3 279 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-216ENST00000530004 RWDD3Q9Y3V2 267 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 PCDHB12Q9Y5F1 795 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 SAR1BQ9Y6B6 198 aa15.29■□□□□ 0.04
TTC39A-216ENST00000530004 ATMINO43313 823 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-216ENST00000530004 NCK2O43639 380 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 TADA2AO75478 443 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 CD19P15391 556 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 PAX3P23760 479 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 BMPR1AP36894 532 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 NSFP46459 744 aaKnown RBP15.28■□□□□ 0.04
TTC39A-216ENST00000530004 BRCC3P46736 316 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 NDST1P52848 882 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
TTC39A-216ENST00000530004 TIGD5Q53EQ6 642 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 LRRC57Q8N9N7 239 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 TMEM176AQ96HP8 235 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 C17orf80Q9BSJ5 609 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 CARD6Q9BX69 1037 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 GDAP2Q9NXN4 497 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 SPG21Q9NZD8 308 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 CTTNBP2NLQ9P2B4 639 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 GTF3C4Q9UKN8 822 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 COG5Q9UP83 839 aa15.28■□□□□ 0.04
TTC39A-216ENST00000530004 CYP1A2P05177 515 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.04
TTC39A-216ENST00000530004 PPM1AP35813 382 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 TAP1Q03518 808 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 TCEAL1Q15170 157 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 FUT10Q6P4F1 479 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 SPRED2Q7Z698 418 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 MCOLN2Q8IZK6 566 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 TMEM169Q96HH4 297 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 MRPL45Q9BRJ2 306 aaKnown RBP15.27■□□□□ 0.04
TTC39A-216ENST00000530004 NKX2-4Q9H2Z4 354 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 GOLPH3Q9H4A6 298 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.04
TTC39A-216ENST00000530004 SNX12Q9UMY4 172 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 LAMA3Q16787 3333 aa15.27■□□□□ 0.04
TTC39A-216ENST00000530004 I3L4J1 428 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 MED7O43513 233 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms