RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 STAP2Q9UGK3 403 aa6.09□□□□□ -1.44
AMBRA1-209ENST00000529963 HERC5Q9UII4 1024 aaKnown RBP6.09□□□□□ -1.44
AMBRA1-209ENST00000529963 COL2A1P02458 1487 aaPredicted RBP6.09□□□□□ -1.44
AMBRA1-209ENST00000529963 DOCK1Q14185 1865 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 BAG3O95817 575 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 GNAI2P04899 355 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 XPAP23025 273 aaPredicted RBP6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 MTNR1BP49286 362 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 HMGCS2P54868 508 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 IRX3P78415 501 aaPredicted RBP6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 MRPS9P82933 396 aaKnown RBP6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 ATP2C1P98194 919 aaPredicted RBP6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 SPIDRQ14159 915 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 TTF1Q15361 905 aaPredicted RBP6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 MUM1Q2TAK8 710 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 ODR4Q5SWX8 454 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 BORAQ6PGQ7 559 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 USP30Q70CQ3 517 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 SIAH1Q8IUQ4 282 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 PIK3C3Q8NEB9 887 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 JADE3Q92613 823 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 OR10A2Q9H208 303 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 IFT122Q9HBG6 1241 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 PARD6AQ9NPB6 346 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 NR2E1Q9Y466 385 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 GPR45Q9Y5Y3 372 aa6.08□□□□□ -1.44
AMBRA1-209ENST00000529963 MGAMO43451 1857 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 SEC24DO94855 1032 aaPredicted RBP6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 LY86O95711 162 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 CFBP00751 764 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 ASNSP08243 561 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 GAAP10253 952 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 RBP3P10745 1247 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 CCND1P24385 295 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 MCAMP43121 646 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 NEK2P51955 445 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 NAA16Q6N069 864 aaPredicted RBP6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 TDHQ8IZJ6 230 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 ZNF384Q8TF68 577 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 RPL10LQ96L21 214 aaKnown RBP6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 DHX36Q9H2U1 1008 aaKnown RBP6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 DMRT3Q9NQL9 472 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 AASDHPPTQ9NRN7 309 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 TMOD4Q9NZQ9 345 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 PI4KBQ9UBF8 816 aa6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 CTDP1Q9Y5B0 961 aaPredicted RBP6.07□□□□□ -1.44
AMBRA1-209ENST00000529963 PTPRFP10586 1907 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 PNMA6EA0A0J9YXQ4 647 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 PRICKLE3O43900 615 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 CNOT4O95628 575 aaKnown RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 HLA-DOAP06340 250 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 INHBBP09529 407 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 TRIM27P14373 513 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 AGXTP21549 392 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 BACE1P56817 501 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 OS9Q13438 667 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 ZMAT1Q5H9K5 638 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 CCDC158Q5M9N0 1113 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 TTC39AQ5SRH9 613 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 ATF7IPQ6VMQ6 1270 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 ZBTB46Q86UZ6 589 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 LGI4Q8N135 537 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 PPP1R14CQ8TAE6 165 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 SH3RF3Q8TEJ3 882 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 SOCS4Q8WXH5 440 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 FRAT1Q92837 279 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 GCDHQ92947 438 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 GFM2Q969S9 779 aaKnown RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 PAWRQ96IZ0 340 aaKnown RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 LRRC37BQ96QE4 947 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 GDF15Q99988 308 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 DPYSL5Q9BPU6 564 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 ACE2Q9BYF1 805 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 GPR108Q9NPR9 543 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 JADE2Q9NQC1 790 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 ING3Q9NXR8 418 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 AATFQ9NY61 560 aaKnown RBP eCLIP6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 MORF4L1Q9UBU8 362 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 ADAMTS20P59510 1910 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 PHIPQ8WWQ0 1821 aa6.06□□□□□ -1.44
AMBRA1-209ENST00000529963 KLHL33A6NCF5 533 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 C19orf81C9J6K1 198 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 MATN2O00339 956 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 ARHGAP6O43182 974 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 DAPK3O43293 454 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 HOXA7P31268 230 aaPredicted RBP6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 GPR15P49685 360 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 RRP1BQ14684 758 aaKnown RBP6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 ZNF568Q3ZCX4 644 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 ABHD15Q6UXT9 468 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 SPOCD1Q6ZMY3 1216 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 ARHGEF18Q6ZSZ5 1173 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 CLEC14AQ86T13 490 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 CERS3Q8IU89 383 aa6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 FOXP4Q8IVH2 680 aaPredicted RBP6.05□□□□□ -1.44
AMBRA1-209ENST00000529963 MAPKAPK5Q8IW41 473 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms