RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 FZD1Q9UP38 647 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 TELO2Q9Y4R8 837 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 GAS8O95995 478 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 GSTA2P09210 222 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 DPEP1P16444 411 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 NSFP46459 744 aaKnown RBP14.94□□□□□ -0.02
USP48-213ENST00000529637 CYP24A1Q07973 514 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 SNRNP48Q6IEG0 339 aaKnown RBP14.94□□□□□ -0.02
USP48-213ENST00000529637 ACAD10Q6JQN1 1059 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 RGS9BPQ6ZS82 235 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 ATL2Q8NHH9 583 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 FBXO27Q8NI29 283 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 ATP6V0A1Q93050 837 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 SMC6Q96SB8 1091 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 KLF6Q99612 283 aaPredicted RBP14.94□□□□□ -0.02
USP48-213ENST00000529637 ANKEF1Q9NU02 776 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 ANKFY1Q9P2R3 1169 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.94□□□□□ -0.02
USP48-213ENST00000529637 GOLGA8RI6L899 631 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 PRPF4O43172 522 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP48-213ENST00000529637 TYROBPO43914 113 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 CCDC22O60826 627 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 EGFRP00533 1210 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 CYP1A2P05177 515 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 LYNP07948 512 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 RALAP11233 206 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 AP1B1Q10567 949 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 P3H1Q32P28 736 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 GPD1LQ8N335 351 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 C11orf70Q9BRQ4 267 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 COL2A1P02458 1487 aaPredicted RBP14.93□□□□□ -0.02
USP48-213ENST00000529637 ZNF862O60290 1169 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 LYPLA2O95372 231 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 ETS1P14921 441 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 KRT4P19013 534 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 SERPINB3P29508 390 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 CCND2P30279 289 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 LRRC23Q53EV4 343 aaPredicted RBP14.93□□□□□ -0.02
USP48-213ENST00000529637 JDP2Q8WYK2 163 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 AZIN2Q96A70 460 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 ZNF184Q99676 751 aaPredicted RBP14.93□□□□□ -0.02
USP48-213ENST00000529637 ARMCX1Q9P291 453 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 LRRIQ4A6NIV6 560 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 RTP1P59025 263 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 NR1H3Q13133 447 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 MTM1Q13496 603 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 FKBP1CQ5VVH2 108 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 SLC39A4Q6P5W5 647 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 LRRC6Q86X45 466 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 VPS52Q8N1B4 723 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 MORC4Q8TE76 937 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 ZNF526Q8TF50 670 aaPredicted RBP14.93□□□□□ -0.02
USP48-213ENST00000529637 MCUR1Q96AQ8 359 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 FHDC1Q9C0D6 1143 aaPredicted RBP14.93□□□□□ -0.02
USP48-213ENST00000529637 POLR3FQ9H1D9 316 aaPredicted RBP14.93□□□□□ -0.02
USP48-213ENST00000529637 SAR1AQ9NR31 198 aa14.93□□□□□ -0.02
USP48-213ENST00000529637 SCNN1BP51168 640 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 GPC3P51654 580 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 EFTUD2Q15029 972 aaKnown RBP eCLIP14.92□□□□□ -0.024e-7■■■□□ 14.8
USP48-213ENST00000529637 CIAPIN1Q6FI81 312 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 ZNF365Q70YC5 407 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 TMEM143Q96AN5 459 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 STX18Q9P2W9 335 aaKnown RBP14.92□□□□□ -0.02
USP48-213ENST00000529637 MAP3K7O43318 606 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 GSTA5Q7RTV2 222 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 ZNF276Q8N554 614 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 ST6GALNAC4Q9H4F1 302 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 VPS37BQ9H9H4 285 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 RPL26L1Q9UNX3 145 aaKnown RBP14.92□□□□□ -0.02
USP48-213ENST00000529637 GJA3Q9Y6H8 435 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 HAUS5O94927 633 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 CETN2P41208 172 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 NOP14P78316 857 aaKnown RBP14.92□□□□□ -0.02
USP48-213ENST00000529637 PRKCEQ02156 737 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 CLEC16AQ2KHT3 1053 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 TMEM270Q6UE05 265 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 STMN2Q93045 179 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 CLPTM1LQ96KA5 538 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 DMAP1Q9NPF5 467 aaPredicted RBP14.92□□□□□ -0.02
USP48-213ENST00000529637 KLHL11Q9NVR0 708 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 SLC17A7Q9P2U7 560 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 PCDHB4Q9Y5E5 795 aa14.92□□□□□ -0.02
USP48-213ENST00000529637 USP1O94782 785 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 CCNFP41002 786 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 SNRPFP62306 86 aaKnown RBP14.91□□□□□ -0.02
USP48-213ENST00000529637 SEZ6Q53EL9 994 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 KAZNQ674X7 775 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 PDCD7Q8N8D1 485 aaKnown RBP14.91□□□□□ -0.02
USP48-213ENST00000529637 AGBL3Q8NEM8 1001 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 NSL1Q96IY1 281 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 SPATA16Q9BXB7 569 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 PSAPP07602 524 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 FDX1P10109 184 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 HMGCS2P54868 508 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 CAV1Q03135 178 aa14.91□□□□□ -0.02
USP48-213ENST00000529637 BRDTQ58F21 947 aaPredicted RBP14.91□□□□□ -0.02
USP48-213ENST00000529637 IZUMO2Q6UXV1 221 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms