RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 RNF180Q86T96 592 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 XYLT1Q86Y38 959 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 RHOT1Q8IXI2 618 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 UBA3Q8TBC4 463 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 GDAP2Q9NXN4 497 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 NFU1Q9UMS0 254 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 USTQ9Y2C2 406 aa16.33■□□□□ 0.21
CCDC90B-213ENST00000529611 A0A0U1RQG5 324 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 KPNA7A9QM74 516 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 PHF2O75151 1096 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 PNPLA4P41247 253 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 ITGA7Q13683 1181 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 EMBQ6PCB8 327 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 ACOT1Q86TX2 421 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 PXYLP1Q8TE99 480 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 KBTBD7Q8WVZ9 684 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 IFT81Q8WYA0 676 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 PPP1R10Q96QC0 940 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 LCMT1Q9UIC8 334 aa16.33■□□□□ 0.2
CCDC90B-213ENST00000529611 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 F8VP50 259 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 FSCN2O14926 492 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 GPR182O15218 404 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 TCF4P15884 667 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 MAP2K2P36507 400 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 TAF6P49848 677 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 ACLYP53396 1101 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 PAK2Q13177 524 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 ZNF268Q14587 947 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 STILQ15468 1287 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 KCTD19Q17RG1 926 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 UNC93AQ86WB7 457 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 KATNAL2Q8IYT4 538 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 SYNCQ9H7C4 482 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 TRMT13Q9NUP7 481 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
CCDC90B-213ENST00000529611 CABYRO75952 493 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 PFKMP08237 780 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 RARAP10276 462 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 KRT3P12035 628 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 LRPAP1P30533 357 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 CHRNA3P32297 505 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 RFC1P35251 1148 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 PTK7Q13308 1070 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 CYP1B1Q16678 543 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 SND1Q7KZF4 910 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 LIMS2Q7Z4I7 341 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 NIPA2Q8N8Q9 360 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 GSTCDQ8NEC7 633 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 OR6B3Q8NGW1 331 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 JOSD2Q8TAC2 188 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 SEC14L1Q92503 715 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 CAVIN3Q969G5 261 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 MCRS1Q96EZ8 462 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 VIPAS39Q9H9C1 493 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 MTUS1Q9ULD2 1270 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 PADI3Q9ULW8 664 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 HCRTO43612 131 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 GNRH1P01148 92 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 GHRP10912 638 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 FGFR1P11362 822 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 CD52P31358 61 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 MLH1P40692 756 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 SSR1P43307 286 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 VEGFBP49765 207 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 LILRA4P59901 499 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 DR1Q01658 176 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 DHX34Q14147 1143 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 PIGHQ14442 188 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 SMC1AQ14683 1233 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 TRIM71Q2Q1W2 868 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 GOLGA7BQ2TAP0 167 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 SV2CQ496J9 727 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 PKDCCQ504Y2 493 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 ZNF618Q5T7W0 954 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 TTC27Q6P3X3 843 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 MAGOHBQ96A72 148 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 HERPUD2Q9BSE4 406 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 DPEP3Q9H4B8 488 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 FAM49BQ9NUQ9 324 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 HPCAL4Q9UM19 191 aa16.31■□□□□ 0.2
CCDC90B-213ENST00000529611 A8MXQ7 604 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 ECHS1P30084 290 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 GJC1P36383 396 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 AFF1P51825 1210 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 CUL1Q13616 776 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 TTC30AQ86WT1 665 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 DDX42Q86XP3 938 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 HACE1Q8IYU2 909 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 LPPQ93052 612 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 GAD1Q99259 594 aa16.3■□□□□ 0.2
CCDC90B-213ENST00000529611 TRIM51Q9BSJ1 452 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms