RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 GRSF1Q12849 480 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTSB-215ENST00000528965 GAS6Q14393 721 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 LPAL2Q16609 132 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 CC2D1AQ6P1N0 951 aaPredicted RBP16.81■□□□□ 0.28
CTSB-215ENST00000528965 LRRTM3Q86VH5 581 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 PDCL2Q8N4E4 241 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
CTSB-215ENST00000528965 DNAJC19Q96DA6 116 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 LRRC3BQ96PB8 259 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 ACBD6Q9BR61 282 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 RTKNQ9BST9 563 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 PI4K2AQ9BTU6 479 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 MORC2Q9Y6X9 1032 aaPredicted RBP16.81■□□□□ 0.28
CTSB-215ENST00000528965 CHURC1-FNTBB4DL54 471 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 PCSK1P29120 753 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 HOXA6P31267 233 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 FNTBP49356 437 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 CDR1P51861 262 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 RBP5P82980 135 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
CTSB-215ENST00000528965 TNK2Q07912 1038 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 KCNA1Q09470 495 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 RESTQ13127 1097 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 CCINQ13939 588 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 INTS6LQ5JSJ4 861 aaKnown RBP16.8■□□□□ 0.28
CTSB-215ENST00000528965 CEP68Q76N32 757 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 C1orf127Q8N9H9 656 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 SLC46A2Q9BY10 475 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 LRRC27Q9C0I9 530 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 SMG9Q9H0W8 520 aaKnown RBP16.8■□□□□ 0.28
CTSB-215ENST00000528965 IKZF4Q9H2S9 585 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 TDP1Q9NUW8 608 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 DDX43Q9NXZ2 648 aaKnown RBP16.8■□□□□ 0.28
CTSB-215ENST00000528965 L1RE1Q9UN81 338 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 MAGED2Q9UNF1 606 aaPredicted RBP16.8■□□□□ 0.28
CTSB-215ENST00000528965 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
CTSB-215ENST00000528965 NCOR2Q9Y618 2525 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 FRMD3A2A2Y4 597 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 K7ESF4 209 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 ATG13O75143 517 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 F11P03951 625 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 KRT19P08727 400 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 HMGA1P17096 107 aaKnown RBP16.79■□□□□ 0.28
CTSB-215ENST00000528965 SYT1P21579 422 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 LHX1P48742 406 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 SPEM2Q0P670 501 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 MYO1EQ12965 1108 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 RUNX3Q13761 415 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 ZNF268Q14587 947 aaPredicted RBP16.79■□□□□ 0.28
CTSB-215ENST00000528965 HEATR6Q6AI08 1181 aaKnown RBP16.79■□□□□ 0.28
CTSB-215ENST00000528965 MON1AQ86VX9 555 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 SPATA2LQ8IUW3 424 aaPredicted RBP16.79■□□□□ 0.28
CTSB-215ENST00000528965 ADGRF2Q8IZF7 708 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 CSGALNACT2Q8N6G5 542 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 TOP6BLQ8N6T0 577 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 NETO1Q8TDF5 533 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 ANKRD36BP1Q96IX9 119 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 GKN1Q9NS71 199 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 GDAP2Q9NXN4 497 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 FRYLO94915 3013 aa16.79■□□□□ 0.28
CTSB-215ENST00000528965 TNNC2P02585 160 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 CASP5P51878 434 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 ATXN1P54253 815 aaKnown RBP16.78■□□□□ 0.28
CTSB-215ENST00000528965 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 PDGFRLQ15198 375 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 SURF1Q15526 300 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 C4orf50Q6ZRC1 276 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 TMEM150AQ86TG1 271 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 WDR5BQ86VZ2 330 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 GPD1LQ8N335 351 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 FSIP1Q8NA03 581 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 USP13Q92995 863 aaPredicted RBP16.78■□□□□ 0.28
CTSB-215ENST00000528965 TRMT2BQ96GJ1 504 aaKnown RBP16.78■□□□□ 0.28
CTSB-215ENST00000528965 INTS4Q96HW7 963 aaKnown RBP16.78■□□□□ 0.28
CTSB-215ENST00000528965 FUBP3Q96I24 572 aaKnown RBP eCLIP16.78■□□□□ 0.28
CTSB-215ENST00000528965 FAM83CQ9BQN1 747 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 MTMR12Q9C0I1 747 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
CTSB-215ENST00000528965 PARD6AQ9NPB6 346 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 TMLHEQ9NVH6 421 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 SNX9Q9Y5X1 595 aa16.78■□□□□ 0.28
CTSB-215ENST00000528965 GOLGA8IPA6NC78 632 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 GOLGA8JA6NMD2 632 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 NOL4O94818 638 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 TGM1P22735 817 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 GPR15P49685 360 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 PDE6CP51160 858 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 WNT7BP56706 349 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 TMEM196Q5HYL7 178 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 TXNDC8Q6A555 127 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 CPA6Q8N4T0 437 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 TNMDQ9H2S6 317 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 EBF3Q9H4W6 596 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 PDE11AQ9HCR9 933 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms