RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 B4GALT4O60513 344 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 SPAG7O75391 227 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 FARP2O94887 1054 aaPredicted RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 ENDOD1O94919 500 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 KRT16P08779 473 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 HOXC6P09630 235 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 POLR2BP30876 1174 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 PHBP35232 272 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 NF2P35240 595 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 RPL22P35268 128 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 MSH2P43246 934 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 STAT5BP51692 787 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 SLC8A3P57103 927 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 GEMIN4P57678 1058 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 SLC25A11Q02978 314 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 SF3A3Q12874 501 aaKnown RBP eCLIP8.81□□□□□ -1
CSTF3-208ENST00000528865 PDIA2Q13087 525 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 ACAP1Q15027 740 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 SLC1A5Q15758 541 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 FAM160B1Q5W0V3 765 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 KAZNQ674X7 775 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 DCUN1D2Q6PH85 259 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 SEPT14Q6ZU15 432 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 PNMA8AQ86V59 439 aaPredicted RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 PPIL6Q8IXY8 311 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 AGGF1Q8N302 714 aaeCLIP8.81□□□□□ -1
CSTF3-208ENST00000528865 ZNF276Q8N554 614 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 ARFGAP1Q8N6T3 406 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 MAB21L3Q8N8X9 362 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 CMASQ8NFW8 434 aaPredicted RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 CFAP61Q8NHU2 1237 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 FBF1Q8TES7 1133 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 SH3TC2Q8TF17 1288 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 AGAP11Q8TF27 550 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 C10orf82Q8WW14 230 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 JDP2Q8WYK2 163 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 CPT1BQ92523 772 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 ALKBH8Q96BT7 664 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 FAM167AQ96KS9 214 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 ANKRD27Q96NW4 1050 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 MCEEQ96PE7 176 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 RAB3IPQ96QF0 476 aaPredicted RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 SMC6Q96SB8 1091 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 MAK16Q9BXY0 300 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 IMPG2Q9BZV3 1241 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 XYLT2Q9H1B5 865 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 MYLK2Q9H1R3 596 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 LRMDAQ9H2I8 198 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 PSMC3IPQ9P2W1 217 aaPredicted RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 GGT7Q9UJ14 662 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 GRID1Q9ULK0 1009 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 SCAF8Q9UPN6 1271 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 CHKBQ9Y259 395 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 C15orf41Q9Y2V0 281 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.81□□□□□ -1
CSTF3-208ENST00000528865 KIAA1217Q5T5P2 1943 aa8.81□□□□□ -1
CSTF3-208ENST00000528865 PHIPQ8WWQ0 1821 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 A0A1W2PPM1 405 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 LRRD1A4D1F6 860 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 POC1B-GALNT4F8VUJ3 575 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 C2CD2LO14523 706 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 MED7O43513 233 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 LGR5O75473 907 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 DCTN3O75935 186 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ZWINTO95229 277 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ANP32DO95626 131 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 IL1BP01584 269 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 T-ENOLP0DO92 83 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 TGFB3P10600 412 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ATF7P17544 494 aaPredicted RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 UBA1P22314 1058 aaKnown RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 PSMA2P25787 234 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ALDH3A1P30838 453 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 RPA3P35244 121 aaPredicted RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 GJC1P36383 396 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 TNFSF9P41273 254 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ASPAP45381 313 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 GABRB2P47870 512 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 HMGCS2P54868 508 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ARL4CP56559 192 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 SP4Q02446 784 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 PDE4CQ08493 712 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 FSTL1Q12841 308 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 FASTKD3Q14CZ7 662 aaKnown RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 SETDB1Q15047 1291 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 E2F5Q15329 346 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 HADHQ16836 314 aaKnown RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 KLHL38Q2WGJ6 581 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 PTPN20Q4JDL3 420 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 SLC45A4Q5BKX6 768 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 DENND1BQ6P3S1 775 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 TSHZ1Q6ZSZ6 1077 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 RIOX2Q8IUF8 465 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 EXOC8Q8IYI6 725 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 KIAA0319LQ8IZA0 1049 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ATP11CQ8NB49 1132 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms