RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PSMD6Q15008 389 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 WDR72Q3MJ13 1102 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 INTS6LQ5JSJ4 861 aaKnown RBP9.73□□□□□ -0.85
CMTM1-210ENST00000528441 DNAJB7Q7Z6W7 309 aaPredicted RBP9.73□□□□□ -0.85
CMTM1-210ENST00000528441 KIAA0895Q8NCT3 520 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 SYAP1Q96A49 352 aaPredicted RBP9.73□□□□□ -0.85
CMTM1-210ENST00000528441 MED10Q9BTT4 135 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 RPP25Q9BUL9 199 aaKnown RBP9.73□□□□□ -0.85
CMTM1-210ENST00000528441 IMPG2Q9BZV3 1241 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 GPR88Q9GZN0 384 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 IRF2BPLQ9H1B7 796 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 KCNH6Q9H252 994 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 GOLPH3LQ9H4A5 285 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 TRPC7Q9HCX4 862 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 FAM86C1Q9NVL1 165 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 WNT16Q9UBV4 365 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 ASB3Q9Y575 518 aa9.73□□□□□ -0.85
CMTM1-210ENST00000528441 MUC3AQ02505 3323 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 A8MXQ7 604 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ANHXE9PGG2 379 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 H0Y858 1186 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ZNF263O14978 683 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 KLRC4O43908 158 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 KINO60870 393 aaKnown RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ECI2O75521 394 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ABL1P00519 1130 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 CSH1P0DML2 217 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 CSH2P0DML3 217 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 HAPLN1P10915 354 aaPredicted RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 NR2F2P24468 414 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 AVPR1AP37288 418 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 GRIK1P39086 918 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 CASP4P49662 377 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 STIM1Q13586 685 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 MAPRE1Q15691 268 aaKnown RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 MLF2Q15773 248 aaPredicted RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 BMT2Q1RMZ1 405 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ZNF667Q5HYK9 610 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 SDHAF4Q5VUM1 108 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 TANGO2Q6ICL3 276 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 TPRG1Q6ZUI0 275 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 SHKBP1Q8TBC3 707 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 MRPS31Q92665 395 aaKnown RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 SMARCD2Q92925 531 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 SMARCE1Q969G3 411 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ACBD6Q9BR61 282 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 TRMT61BQ9BVS5 477 aaKnown RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 DNAI2Q9GZS0 605 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 CRISPLD1Q9H336 500 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 MAGEC2Q9UBF1 373 aaPredicted RBP9.72□□□□□ -0.85
CMTM1-210ENST00000528441 HPSEQ9Y251 543 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 PTPRJQ12913 1337 aa9.72□□□□□ -0.85
CMTM1-210ENST00000528441 KMT2EQ8IZD2 1858 aa9.71□□□□□ -0.85
CMTM1-210ENST00000528441 HEPACAM2A8MVW5 462 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 PDXKO00764 312 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 NCAM2O15394 837 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 DCNP07585 359 aaKnown RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 EPB41P11171 864 aaKnown RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 AOC1P19801 751 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 CYP2F1P24903 491 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 HOXD13P35453 343 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 GNL1P36915 607 aaPredicted RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 VIPR2P41587 438 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 CCR2P41597 374 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 GPR15P49685 360 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 CLCN5P51795 746 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 KPNA1P52294 538 aaPredicted RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 AP3M2P53677 418 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 MYL6P60660 151 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 PNOCQ13519 176 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 NCOA4Q13772 614 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 DDR2Q16832 855 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 SLC44A4Q53GD3 710 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 DCAF17Q5H9S7 520 aaPredicted RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 MDH1BQ5I0G3 518 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 FAM78AQ5JUQ0 283 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 PRSS36Q5K4E3 855 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 CWF19L1Q69YN2 538 aaKnown RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 DPH6Q7L8W6 267 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 OSTM1Q86WC4 334 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 FAM186BQ8IYM0 893 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 TMEM105Q8N8V8 129 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 STKLD1Q8NE28 680 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 PRSS33Q8NF86 280 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 DEPDC1BQ8WUY9 529 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 IRF7Q92985 503 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 MYLPFQ96A32 169 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 ELSPBP1Q96BH3 223 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 HS3ST6Q96QI5 342 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 BCO2Q9BYV7 579 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 FOXQ1Q9C009 403 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 DNAJC25Q9H1X3 360 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 AVENQ9NQS1 362 aaPredicted RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 GDAP2Q9NXN4 497 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms