RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 IQCB1Q15051 598 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 CNGA2Q16280 664 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 LMBRD2Q68DH5 695 aaPredicted RBP7.13□□□□□ -1.27
PCF11-202ENST00000528336 TSHZ1Q6ZSZ6 1077 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 BEND2Q8NDZ0 799 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 CAVIN3Q969G5 261 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 FUBP1Q96AE4 644 aaKnown RBP7.13□□□□□ -1.27
PCF11-202ENST00000528336 APIPQ96GX9 242 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 SUCLG2Q96I99 432 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 SPATA5L1Q9BVQ7 753 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 UBA5Q9GZZ9 404 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 TMPRSS5Q9H3S3 457 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 ZNF287Q9HBT7 754 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 STK32BQ9NY57 414 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 OGDHLQ9ULD0 1010 aa7.13□□□□□ -1.27
PCF11-202ENST00000528336 ATAD2BQ9ULI0 1458 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 TMEM191CA6NGB0 347 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 DCLK1O15075 740 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 FRS3O43559 492 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 PQBP1O60828 265 aaKnown RBP7.12□□□□□ -1.27
PCF11-202ENST00000528336 HKR1P10072 659 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 ZNF134P52741 427 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 LILRA4P59901 499 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 POLD3Q15054 466 aaPredicted RBP7.12□□□□□ -1.27
PCF11-202ENST00000528336 C3orf38Q5JPI3 329 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 TMEM108Q6UXF1 575 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 Q6YL49 198 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 Q6ZPA2 131 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 SUPT20HQ8NEM7 779 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 SMURF2Q9HAU4 748 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 DDX21Q9NR30 783 aaKnown RBP eCLIP7.12□□□□□ -1.27
PCF11-202ENST00000528336 DMTF1Q9Y222 760 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 SMARCA2P51531 1590 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 PEG3Q9GZU2 1588 aa7.12□□□□□ -1.27
PCF11-202ENST00000528336 NCAPD3P42695 1498 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 SPATA31A3Q5VYP0 1347 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 ISM1B1AKI9 464 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 TRIAP1O43715 76 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 AKAP8O43823 692 aaKnown RBP7.11□□□□□ -1.27
PCF11-202ENST00000528336 PEX14O75381 377 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 PPP3CBP16298 524 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 KRT4P19013 534 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.27
PCF11-202ENST00000528336 RBM20Q5T481 1227 aaKnown RBP7.11□□□□□ -1.27
PCF11-202ENST00000528336 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.11□□□□□ -1.27
PCF11-202ENST00000528336 RAPGEF4Q8WZA2 1011 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 LPIN2Q92539 896 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 MOGAT1Q96PD6 335 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 SARGQ9BW04 601 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 DPH1Q9BZG8 443 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 TPSD1Q9BZJ3 242 aa7.11□□□□□ -1.27
PCF11-202ENST00000528336 MS4A7Q9GZW8 240 aaPredicted RBP7.11□□□□□ -1.27
PCF11-202ENST00000528336 RSF1Q96T23 1441 aaPredicted RBP7.1□□□□□ -1.27
PCF11-202ENST00000528336 A0A087WWL8 130 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 GRID2IPA4D2P6 1211 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 CYR61O00622 381 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 APAF1O14727 1248 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 CAND2O75155 1236 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 SOAT2O75908 522 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 KRT18P05783 430 aaKnown RBP7.1□□□□□ -1.27
PCF11-202ENST00000528336 ATXN1LP0C7T5 689 aaKnown RBP7.1□□□□□ -1.27
PCF11-202ENST00000528336 SRGNP10124 158 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 CD6P30203 668 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 AVPR1BP47901 424 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 TBX4P57082 545 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 TAP1Q03518 808 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 RAB32Q13637 225 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 SLC44A4Q53GD3 710 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 HECTD2Q5U5R9 776 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 VPS53Q5VIR6 699 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 LNX2Q8N448 690 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 B3GALNT2Q8NCR0 500 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 MAML1Q92585 1016 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 PRRX2Q99811 253 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 PCED1AQ9H1Q7 454 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 SYBUQ9NX95 663 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 KCTD5Q9NXV2 234 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 SNX13Q9Y5W8 968 aa7.1□□□□□ -1.27
PCF11-202ENST00000528336 FOXN1O15353 648 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 YY2O15391 372 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 PEX1O43933 1283 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 RAMP2O60895 175 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 SLPIP03973 132 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 TRIM27P14373 513 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 VIPR2P41587 438 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 PXNP49023 591 aaPredicted RBP7.09□□□□□ -1.27
PCF11-202ENST00000528336 BLOC1S1P78537 153 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 RALBP1Q15311 655 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 VWA1Q6PCB0 445 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 Q6ZNX1 250 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 LINC00476Q8WZB0 136 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 FBXL20Q96IG2 436 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 AMBRA1Q9C0C7 1298 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 ZNF518BQ9C0D4 1074 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 NUP62CLQ9H1M0 184 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 AFF4Q9UHB7 1163 aaKnown RBP7.09□□□□□ -1.27
PCF11-202ENST00000528336 SHOC2Q9UQ13 582 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms