RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 TOP3BO95985 862 aaKnown RBP13.31□□□□□ -0.28
SRPRA-202ENST00000527817 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
SRPRA-202ENST00000527817 TNFSF9P41273 254 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 DGKEP52429 567 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 C9orf57Q5W0N0 161 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 PMS2CLQ68D20 193 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 KCNK18Q7Z418 384 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 LRRTM3Q86VH5 581 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 THEM5Q8N1Q8 247 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 EZH1Q92800 747 aaPredicted RBP13.31□□□□□ -0.28
SRPRA-202ENST00000527817 CD101Q93033 1021 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 C8orf76Q96K31 380 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 ECT2Q9H8V3 914 aa13.31□□□□□ -0.28
SRPRA-202ENST00000527817 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 CDC25AP30304 524 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 GBP1P32455 592 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 IRX4P78413 519 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 METTL23Q86XA0 190 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 CPA6Q8N4T0 437 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 SYT2Q8N9I0 419 aaPredicted RBP13.3□□□□□ -0.28
SRPRA-202ENST00000527817 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 MRPS31Q92665 395 aaKnown RBP13.3□□□□□ -0.28
SRPRA-202ENST00000527817 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
SRPRA-202ENST00000527817 KCND2Q9NZV8 630 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 EVLQ9UI08 416 aaPredicted RBP13.3□□□□□ -0.28
SRPRA-202ENST00000527817 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
SRPRA-202ENST00000527817 DERAQ9Y315 318 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 PI4KAP42356 2102 aa13.3□□□□□ -0.28
SRPRA-202ENST00000527817 MYH11P35749 1972 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 PP2D1A8MPX8 630 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 LAD1O00515 517 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 CYB561D2O14569 222 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 PIGRP01833 764 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 CSH1P0DML2 217 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 CSH2P0DML3 217 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 SCP2P22307 547 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 NMT1P30419 496 aaKnown RBP13.29□□□□□ -0.28
SRPRA-202ENST00000527817 PRPHP41219 470 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 RAD51AP2Q09MP3 1159 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 NR1H3Q13133 447 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 HYIQ5T013 277 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 NAIF1Q69YI7 327 aaPredicted RBP13.29□□□□□ -0.28
SRPRA-202ENST00000527817 RASSF3Q86WH2 238 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
SRPRA-202ENST00000527817 TSTD1Q8NFU3 115 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 OSCP1Q8WVF1 389 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 BICD1Q96G01 975 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
SRPRA-202ENST00000527817 LARSQ9P2J5 1176 aaKnown RBP13.29□□□□□ -0.28
SRPRA-202ENST00000527817 INVSQ9Y283 1065 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 NEUROG3Q9Y4Z2 214 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 PCDHB5Q9Y5E4 795 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 SCN1AP35498 2009 aa13.29□□□□□ -0.28
SRPRA-202ENST00000527817 LAMA5O15230 3695 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 A0A0B4J269 797 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 PATE3B3GLJ2 98 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRPRA-202ENST00000527817 LIG4P49917 911 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
SRPRA-202ENST00000527817 CDR1P51861 262 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 RING1Q06587 406 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 ST3GAL1Q11201 340 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 PSMD2Q13200 908 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 NBR1Q14596 966 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 MTF1Q14872 753 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 IL17AQ16552 155 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 DTHD1Q6ZMT9 781 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 CYP2U1Q7Z449 544 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 DEFB124Q8NES8 71 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 USP33Q8TEY7 942 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 ZCCHC14Q8WYQ9 949 aaKnown RBP13.28□□□□□ -0.28
SRPRA-202ENST00000527817 ATP2A3Q93084 1043 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 ASB7Q9H672 318 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 TMEM206Q9H813 350 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 UXTQ9UBK9 157 aaPredicted RBP13.28□□□□□ -0.28
SRPRA-202ENST00000527817 CPSF3Q9UKF6 684 aaKnown RBP13.28□□□□□ -0.28
SRPRA-202ENST00000527817 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 MSRB2Q9Y3D2 182 aa13.28□□□□□ -0.28
SRPRA-202ENST00000527817 ANK1P16157 1881 aa13.27□□□□□ -0.28
SRPRA-202ENST00000527817 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 TAF6P49848 677 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 NEK4P51957 841 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 SLC12A3P55017 1021 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 LMAN2Q12907 356 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 GNL2Q13823 731 aaKnown RBP13.27□□□□□ -0.29
SRPRA-202ENST00000527817 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 ZNF77Q15935 545 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 EML3Q32P44 896 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.29
SRPRA-202ENST00000527817 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms