RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 TRNAU1APQ9NX07 287 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 SCAF8Q9UPN6 1271 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 BAIAP2Q9UQB8 552 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 A0A0G2JPF8 293 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 HNRNPCL3B7ZW38 293 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 TRIM13O60858 407 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 EPN2O95208 641 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 HNRNPCL4P0DMR1 293 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 ENO3P13929 434 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 MTMR2Q13614 643 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 DGUOKQ16854 277 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 MMP19Q99542 508 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 SPRTNQ9H040 489 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 TIMMDC1Q9NPL8 285 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 C8orf4Q9NR00 106 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 BTBD3Q9Y2F9 522 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 ALOX12P18054 663 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 PSMC2P35998 433 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 PTDSS1P48651 473 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 TRAF2Q12933 501 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 C6orf183Q5T699 404 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 PAPD7Q5XG87 772 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 RHOT2Q8IXI1 618 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 ENKURQ8TC29 256 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 HESX1Q9UBX0 185 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 PRG3Q9Y2Y8 225 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 VWDEQ8N2E2 1590 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 OSTNP61366 133 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 UNC45BQ8IWX7 931 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 ATL2Q8NHH9 583 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 COX4I2Q96KJ9 171 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 FAM49AQ9H0Q0 323 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 CLIC5Q9NZA1 410 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
FGFR1-227ENST00000526570 DEPDC5O75140 1603 aa12.88□□□□□ -0.35
FGFR1-227ENST00000526570 TAB1Q15750 504 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PRAMEF18Q5VWM3 479 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 STK32CQ86UX6 486 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 RFX6Q8HWS3 928 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 USP38Q8NB14 1042 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 NEUROG2Q9H2A3 272 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 GIN1Q9NXP7 522 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PFDN6O15212 129 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 CSPG5O95196 566 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 USP46P62068 366 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TP53BP2Q13625 1128 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 SCYL2Q6P3W7 929 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PDZD4Q76G19 769 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 MAGED4Q96JG8 741 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TMEM237Q96Q45 408 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 CDC40O60508 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 KRT39Q6A163 491 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 CCDC60Q8IWA6 550 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 JADE3Q92613 823 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 ZNF212Q9UDV6 495 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TUBE1Q9UJT0 475 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 EME2A4GXA9 379 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 CDH16O75309 829 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 CLCN2P51788 898 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 KCNJ2P63252 427 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 YWHAHQ04917 246 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TRMT5Q32P41 509 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 BNIPLQ7Z465 357 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 RIBC1Q8N443 379 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PDCD10Q9BUL8 212 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 PHGDHO43175 533 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 MTRF1O75570 445 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms