RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 DDX6P26196 483 aaKnown RBP eCLIP11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 CASP5P51878 434 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 RBP5P82980 135 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 DGKKQ5KSL6 1271 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 CNNM4Q6P4Q7 775 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 SPEM1Q8N4L4 309 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 CELF5Q8N6W0 485 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 C1orf127Q8N9H9 656 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 FSIP1Q8NA03 581 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 BPIFB1Q8TDL5 484 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 SAAL1Q96ER3 474 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 CHAMP1Q96JM3 812 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 C7orf25Q9BPX7 421 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 LPIN3Q9BQK8 851 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 IL21Q9HBE4 155 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 GDAP2Q9NXN4 497 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 ABI2Q9NYB9 513 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 PTPRZ1P23471 2315 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 COL4A2P08572 1712 aa11.94□□□□□ -0.5
AMBRA1-204ENST00000526545 FANCMQ8IYD8 2048 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 MYL1P05976 194 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 CSH1P0DML2 217 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 CSH2P0DML3 217 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 TDGF1P13385 188 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 SDHBP21912 280 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 AVPR1AP37288 418 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 CXCL12P48061 93 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 LHX1P48742 406 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 RPL10AP62906 217 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 MYL7Q01449 175 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 SURF1Q15526 300 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 TSSK4Q6SA08 328 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 DPH6Q7L8W6 267 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 CMTM8Q8IZV2 173 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 GPD1LQ8N335 351 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 SYNPOQ8N3V7 929 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 PDCL2Q8N4E4 241 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 TOP6BLQ8N6T0 577 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 CXorf38Q8TB03 319 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 GIPC2Q8TF65 315 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 LRRC3BQ96PB8 259 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 CBWD1Q9BRT8 395 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 SLC46A2Q9BY10 475 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 KIAA1586Q9HCI6 787 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 DDX43Q9NXZ2 648 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 UXTQ9UBK9 157 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 L1RE1Q9UN81 338 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 FAM186AA6NE01 2351 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 TSC2P49815 1807 aa11.93□□□□□ -0.5
AMBRA1-204ENST00000526545 ANK1P16157 1881 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 ZNF233A6NK53 670 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 GABRDO14764 452 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 ZNF202O95125 648 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PAPSS2O95340 614 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 F11P03951 625 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 KRT19P08727 400 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 TMEM191BP0C7N4 346 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 HMGA1P17096 107 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PCSK1P29120 753 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 CTHP32929 405 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 NDUFA8P51970 172 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 NLRP12P59046 1061 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 CYP4F8P98187 520 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PUM1Q14671 1186 aaKnown RBP eCLIP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 GPIHBP1Q8IV16 184 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 DCLK2Q8N568 766 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 RMDN1Q96DB5 314 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 TRMT2BQ96GJ1 504 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 FUBP3Q96I24 572 aaKnown RBP eCLIP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 ANKRD36BP1Q96IX9 119 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PI4K2AQ9BTU6 479 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 TRIM9Q9C026 710 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 KIF9Q9HAQ2 790 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 PDE11AQ9HCR9 933 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 GTSE1Q9NYZ3 720 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 SERTAD1Q9UHV2 236 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 SMG5Q9UPR3 1016 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 GVINP1Q7Z2Y8 2422 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 SPTBN4Q9H254 2564 aa11.92□□□□□ -0.5
AMBRA1-204ENST00000526545 CACNA1IQ9P0X4 2223 aa11.91□□□□□ -0.5
AMBRA1-204ENST00000526545 PVALEFA0A1B0GWK0 134 aa11.91□□□□□ -0.5
AMBRA1-204ENST00000526545 GOLGA8IPA6NC78 632 aa11.91□□□□□ -0.5
AMBRA1-204ENST00000526545 GOLGA8JA6NMD2 632 aa11.91□□□□□ -0.5
AMBRA1-204ENST00000526545 EIF3DO15371 548 aaKnown RBP eCLIP11.91□□□□□ -0.5
AMBRA1-204ENST00000526545 PRPF6O94906 941 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-204ENST00000526545 PRAMEF12O95522 483 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms