RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ALADP13716 330 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 RAP1GAPP47736 663 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 CCDC142Q17RM4 750 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 CCDC40Q4G0X9 1142 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 DCAF17Q5H9S7 520 aaPredicted RBP17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 CYP4A22Q5TCH4 519 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 SEPT5Q99719 369 aaPredicted RBP17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 SDCBP2Q9H190 292 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 DNAJC25Q9H1X3 360 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 CRTAC1Q9NQ79 661 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 RWDD2AQ9UIY3 292 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 ASB3Q9Y575 518 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 MUC3AQ02505 3323 aa17.34■□□□□ 0.37
SSSCA1-202ENST00000526433 A8MXQ7 604 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 ZNF197O14709 1029 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 PTPN1P18031 435 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 CYP2F1P24903 491 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 MXI1P50539 228 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 NLRP12P59046 1061 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 PSMC1P62191 440 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 SLC5A9Q2M3M2 681 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 SCARA5Q6ZMJ2 495 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 DNAJB7Q7Z6W7 309 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 SPATA2LQ8IUW3 424 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 FAM200AQ8TCP9 573 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 SEMA4DQ92854 862 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 FGF13Q92913 245 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 IMPG2Q9BZV3 1241 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 APOBEC3GQ9HC16 384 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 RAB20Q9NX57 234 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 EPS15L1Q9UBC2 864 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 CDH7Q9ULB5 785 aa17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 ZFP37Q9Y6Q3 630 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-202ENST00000526433 FGFR1OPO95684 399 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 GNA14O95837 355 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 ASGR2P07307 311 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 MYL4P12829 197 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 EPHA5P54756 1037 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 MAPRE1Q15691 268 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 CBWD6Q4V339 395 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 CBWD3Q5JTY5 395 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 PRSS36Q5K4E3 855 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 CBWD5Q5RIA9 395 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 PDZD4Q76G19 769 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 FBXL13Q8NEE6 735 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 MYCBPAPQ8TBZ2 947 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 GIPC2Q8TF65 315 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 ING5Q8WYH8 240 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 SLC35C1Q96A29 364 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 TCEAL4Q96EI5 215 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 MED15Q96RN5 788 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 LPIN3Q9BQK8 851 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 LRRC3Q9BY71 257 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 ABCB6Q9NP58 842 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 ASAH2Q9NR71 780 aa17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-202ENST00000526433 ATF6P18850 670 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 CCR2P41597 374 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 NOP14P78316 857 aaKnown RBP17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 MDH1BQ5I0G3 518 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 ITIH5Q86UX2 942 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 LEMD2Q8NC56 503 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 GPR152Q8TDT2 470 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 PSMG2Q969U7 264 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 MYLPFQ96A32 169 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 FUBP3Q96I24 572 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 DPEP3Q9H4B8 488 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 KCNK12Q9HB15 430 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 COQ4Q9Y3A0 265 aa17.31■□□□□ 0.36
SSSCA1-202ENST00000526433 TRIOO75962 3097 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 MOSPD3O75425 235 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 MICAL2O94851 1124 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 MBD3O95983 291 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 CEBPBP17676 345 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 ASPAP45381 313 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 GPR15P49685 360 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 ZXDAP98168 799 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 CYP27A1Q02318 531 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 VEPH1Q14D04 833 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 TAF12Q16514 161 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 DDR2Q16832 855 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 DPCR1Q3MIW9 517 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 CFAP221Q4G0U5 840 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 WDR44Q5JSH3 913 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 SDHAF4Q5VUM1 108 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 POTEHQ6S545 545 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 RSAD2Q8WXG1 361 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 EDAQ92838 391 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 TATDN2Q93075 761 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 PCED1BQ96HM7 432 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 BCO2Q9BYV7 579 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 CYP3A43Q9HB55 503 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
SSSCA1-202ENST00000526433 SORCS3Q9UPU3 1222 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms