RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 FAM124BQ9H5Z6 455 aaPredicted RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 CBX8Q9HC52 389 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 CRTAC1Q9NQ79 661 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 TAB2Q9NYJ8 693 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 GCNT4Q9P109 453 aa13.8□□□□□ -0.2
SMPD1-202ENST00000526280 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
SMPD1-202ENST00000526280 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 BECN2A8MW95 431 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CILPO75339 1184 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 PTPN1P18031 435 aaKnown RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 SLC9A1P19634 815 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 TBXAS1P24557 533 aaPredicted RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CDR1P51861 262 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 NDST1P52848 882 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 MRPS5P82675 430 aaKnown RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 MAPRE1Q15691 268 aaKnown RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CCDC142Q17RM4 750 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CES5AQ6NT32 575 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 LRSAM1Q6UWE0 723 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CYP26C1Q6V0L0 522 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 GPR149Q86SP6 731 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CRYBG2Q8N1P7 616 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 TTC39CQ8N584 583 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 TTC9BQ8N6N2 239 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 ANKRD20A12PQ8NF67 263 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 FEZF2Q8TBJ5 459 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 MYCBPAPQ8TBZ2 947 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 SPPL2BQ8TCT7 592 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 WHAMMQ8TF30 809 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 ZNF707Q96C28 371 aaPredicted RBP13.79□□□□□ -0.2
SMPD1-202ENST00000526280 RHOBTB2Q9BYZ6 727 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 PRKD2Q9BZL6 878 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 VPS16Q9H269 839 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 CISHQ9NSE2 258 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 SLC27A5Q9Y2P5 690 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 PCDHB5Q9Y5E4 795 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 INSL5Q9Y5Q6 135 aa13.79□□□□□ -0.2
SMPD1-202ENST00000526280 GRXCR2A6NFK2 248 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 DLL1O00548 723 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 MBTPS2O43462 519 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 TPM2P07951 284 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 POU2F2P09086 479 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 ATP1A3P13637 1013 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 CD58P19256 250 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 PON1P27169 355 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 COPB1P53618 953 aaKnown RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 PTCRAQ6ISU1 281 aaPredicted RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 PHLDB3Q6NSJ2 640 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 APTXQ7Z2E3 356 aaKnown RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 LUZP1Q86V48 1076 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 SUSD6Q92537 303 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 FUBP3Q96I24 572 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 ABCB6Q9NP58 842 aa13.78□□□□□ -0.2
SMPD1-202ENST00000526280 ABI2Q9NYB9 513 aaPredicted RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
SMPD1-202ENST00000526280 CCL16O15467 120 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 HAPLN1P10915 354 aaPredicted RBP13.77□□□□□ -0.21
SMPD1-202ENST00000526280 CYP2F1P24903 491 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 ZNF445P59923 1031 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
SMPD1-202ENST00000526280 GCNT1Q02742 428 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 KCNMA1Q12791 1236 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 CFAP221Q4G0U5 840 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 MDH1BQ5I0G3 518 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 ATAT1Q5SQI0 421 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 DPY19L2P1Q6NXN4 242 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 C4orf50Q6ZRC1 276 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 RRAGAQ7L523 313 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 GAS2L3Q86XJ1 694 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 SPATA2LQ8IUW3 424 aaPredicted RBP13.77□□□□□ -0.21
SMPD1-202ENST00000526280 UBR7Q8N806 425 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 FAM200AQ8TCP9 573 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 SMG7Q92540 1137 aaKnown RBP13.77□□□□□ -0.21
SMPD1-202ENST00000526280 KAT5Q92993 513 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 ASB2Q96Q27 587 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 NT5C1AQ9BXI3 368 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
SMPD1-202ENST00000526280 ELOVL4Q9GZR5 314 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 TSPY26PQ9H489 355 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 GRPEL1Q9HAV7 217 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 UBE2TQ9NPD8 197 aaPredicted RBP13.77□□□□□ -0.21
SMPD1-202ENST00000526280 CDH22Q9UJ99 828 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms