RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PTPN2P17706 415 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 ACAT1P24752 427 aaKnown RBP18.43■□□□□ 0.54
LMX1B-203ENST00000526117 ALDH1A3P47895 512 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 TWF1Q12792 350 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 KCNH2Q12809 1159 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 WDR44Q5JSH3 913 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 SPOPLQ6IQ16 392 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 OTOP3Q7RTS5 596 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 ZDHHC14Q8IZN3 488 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 CRYBG2Q8N1P7 616 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 PLCD3Q8N3E9 789 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 OR6B3Q8NGW1 331 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 FEZF2Q8TBJ5 459 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 TNIP3Q96KP6 325 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 PI4K2AQ9BTU6 479 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 CRTAC1Q9NQ79 661 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.43■□□□□ 0.54
LMX1B-203ENST00000526117 DNMT3BQ9UBC3 853 aaKnown RBP18.43■□□□□ 0.54
LMX1B-203ENST00000526117 GTF3C4Q9UKN8 822 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 CUL9Q8IWT3 2517 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 MYBPHLA2RUH7 354 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 EPHB3P54753 998 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 TPD52L1Q16890 204 aaPredicted RBP18.42■□□□□ 0.54
LMX1B-203ENST00000526117 VSTM1Q6UX27 236 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 GRASPQ7Z6J2 395 aaPredicted RBP18.42■□□□□ 0.54
LMX1B-203ENST00000526117 B3GALNT2Q8NCR0 500 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 PSMG2Q969U7 264 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 CEP72Q9P209 647 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 BDP1A6H8Y1 2624 aa18.42■□□□□ 0.54
LMX1B-203ENST00000526117 TCF20Q9UGU0 1960 aaKnown RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 GTPBP10A4D1E9 387 aaKnown RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 A8MXQ7 604 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 PTPN1P18031 435 aaKnown RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 CDH8P55286 799 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 RPL10AP62906 217 aaKnown RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 SKOR2Q2VWA4 1001 aaPredicted RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 PABPC1LQ4VXU2 614 aaKnown RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 IQCEQ6IPM2 695 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 SCARA5Q6ZMJ2 495 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 ITIH5Q86UX2 942 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 SPATA2LQ8IUW3 424 aaPredicted RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 GJD3Q8N144 294 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 TTC9BQ8N6N2 239 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 LMO3Q8TAP4 145 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 ACSF2Q96CM8 615 aaPredicted RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 ZNF512Q96ME7 567 aaPredicted RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 DNAI2Q9GZS0 605 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 ABI2Q9NYB9 513 aaPredicted RBP18.41■□□□□ 0.54
LMX1B-203ENST00000526117 EPS15L1Q9UBC2 864 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 PTPRDP23468 1912 aa18.41■□□□□ 0.54
LMX1B-203ENST00000526117 ZNF197O14709 1029 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 HCRTO43612 131 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 ATP2C2O75185 946 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 LRRN2O75325 713 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 CILPO75339 1184 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 FGF19O95750 216 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 RHOP08100 348 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 PDGFRBP09619 1106 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 ATF6P18850 670 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 TRIM21P19474 475 aaKnown RBP18.4■□□□□ 0.54
LMX1B-203ENST00000526117 FSHRP23945 695 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 TBXAS1P24557 533 aaPredicted RBP18.4■□□□□ 0.54
LMX1B-203ENST00000526117 EEF1GP26641 437 aaKnown RBP18.4■□□□□ 0.54
LMX1B-203ENST00000526117 RAP1GAPP47736 663 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 PSMC1P62191 440 aaKnown RBP18.4■□□□□ 0.54
LMX1B-203ENST00000526117 TYRO3Q06418 890 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 MGAT5BQ3V5L5 792 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 PRSS36Q5K4E3 855 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 TDRD5Q8NAT2 981 aaKnown RBP18.4■□□□□ 0.54
LMX1B-203ENST00000526117 PCED1BQ96HM7 432 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 BPIFA3Q9BQP9 254 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 LRRC3Q9BY71 257 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 MAGEC2Q9UBF1 373 aaPredicted RBP18.4■□□□□ 0.54
LMX1B-203ENST00000526117 SLC27A5Q9Y2P5 690 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 NFE2L3Q9Y4A8 694 aa18.4■□□□□ 0.54
LMX1B-203ENST00000526117 NOTCH4Q99466 2003 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 C2CD4DB7Z1M9 353 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 NDST1P52848 882 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 YWHAEP62258 255 aaKnown RBP18.39■□□□□ 0.53
LMX1B-203ENST00000526117 CUL2Q13617 745 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 VEPH1Q14D04 833 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 MAN2A1Q16706 1144 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 CDKAL1Q5VV42 579 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 C11orf57Q6ZUT1 292 aaPredicted RBP18.39■□□□□ 0.53
LMX1B-203ENST00000526117 TMC8Q8IU68 726 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 MYLPFQ96A32 169 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 ELMO3Q96BJ8 720 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 SPATA17Q96L03 361 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 NECAB3Q96P71 396 aaPredicted RBP18.39■□□□□ 0.53
LMX1B-203ENST00000526117 SEPT5Q99719 369 aaPredicted RBP18.39■□□□□ 0.53
LMX1B-203ENST00000526117 NT5C1AQ9BXI3 368 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 ELOVL4Q9GZR5 314 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 CD320Q9NPF0 282 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 ASAH2Q9NR71 780 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 HCFC1R1Q9NWW0 138 aa18.39■□□□□ 0.53
LMX1B-203ENST00000526117 TTC28Q96AY4 2481 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms