RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 KIF22Q14807 665 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 PRAMEF14Q5SWL7 426 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 Q6ZRM9 215 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 ANKRD18AQ8IVF6 992 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 SUGP1Q8IWZ8 645 aaKnown RBP5.39□□□□□ -1.55
CSDE1-211ENST00000525970 IL17RDQ8NFM7 739 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 IQCDQ96DY2 449 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 UBXN10Q96LJ8 280 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 SENP6Q9GZR1 1112 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-211ENST00000525970 OBP2BQ9NPH6 170 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 ITM2CQ9NQX7 267 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 TM7SF3Q9NS93 570 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 RRN3Q9NYV6 651 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 SLC39A10Q9ULF5 831 aa5.39□□□□□ -1.55
CSDE1-211ENST00000525970 LGALS16A8MUM7 142 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 GOLGA6L6A8MZA4 724 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 ACKR2O00590 384 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 SBK3P0C264 359 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 IL2RBP14784 551 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 MAPK9P45984 424 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 SLC25A3Q00325 362 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 TOB2Q14106 344 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-211ENST00000525970 PTK2BQ14289 1009 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 POSTNQ15063 836 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 INTS11Q5TA45 600 aaKnown RBP5.38□□□□□ -1.55
CSDE1-211ENST00000525970 OTUD7BQ6GQQ9 843 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 TANGO2Q6ICL3 276 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 ZNF783Q6ZMS7 281 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 RFX8Q6ZV50 586 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 BEND5Q7L4P6 421 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 TXLNBQ8N3L3 684 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 VGLL2Q8N8G2 317 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 PPHLN1Q8NEY8 458 aaKnown RBP5.38□□□□□ -1.55
CSDE1-211ENST00000525970 FBXO18Q8NFZ0 1043 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 ZNF384Q8TF68 577 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 STON2Q8WXE9 905 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 PPM1MQ96MI6 270 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 NELL2Q99435 816 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 MNTQ99583 582 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 HEPHQ9BQS7 1158 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 TTPALQ9BTX7 342 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 EIF2AQ9BY44 585 aaKnown RBP5.38□□□□□ -1.55
CSDE1-211ENST00000525970 ZNF518BQ9C0D4 1074 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 C11orf54Q9H0W9 315 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-211ENST00000525970 KCNH6Q9H252 994 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 SPON1Q9HCB6 807 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 SLC23A1Q9UHI7 598 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 MAN2B2Q9Y2E5 1009 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 PAXBP1Q9Y5B6 917 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 SCINQ9Y6U3 715 aa5.38□□□□□ -1.55
CSDE1-211ENST00000525970 MBD3L4A6NDZ8 208 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 MBD3L3A6NE82 208 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 PRR5-ARHGAP8B1AHC4 643 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 EYA2O00167 538 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 TEX33O43247 280 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 ALDH1A3P47895 512 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 ITGA8P53708 1063 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 SLC13A2Q13183 592 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 CTBP1Q13363 440 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 SPARCL1Q14515 664 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 SLC4A8Q2Y0W8 1093 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 PABPC1LQ4VXU2 614 aaKnown RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 WDR78Q5VTH9 848 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 LAIR1Q6GTX8 287 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 JMJD6Q6NYC1 403 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 GGT6Q6P531 493 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 SEM1Q6ZVN7 128 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 STT3BQ8TCJ2 826 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 HAS1Q92839 578 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 TNPO1Q92973 898 aaKnown RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 SKA1Q96BD8 255 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 CEP95Q96GE4 821 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 EIF2AK1Q9BQI3 630 aaKnown RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 LSM14BQ9BX40 385 aaKnown RBP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 TMEM8AQ9HCN3 771 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 RLIMQ9NVW2 624 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 DACT1Q9NYF0 836 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 CEP83Q9Y592 693 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSDE1-211ENST00000525970 XDHP47989 1333 aa5.37□□□□□ -1.55
CSDE1-211ENST00000525970 A0A087WWL8 130 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 A0A087WZ62 844 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 FAM234BA2RU67 622 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 B5MCH6 92 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 J3KRW8 73 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 GRM6O15303 877 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 THAP12O43422 761 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 TBC1D4O60343 1298 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 SLC43A1O75387 559 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 DNAJB5O75953 348 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 RHOBTB3O94955 611 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 ITGA5P08648 1049 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 GABRB3P28472 473 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 SLC6A4P31645 630 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 RABGGTBP53611 331 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 GEMIN4P57678 1058 aaKnown RBP5.36□□□□□ -1.55
CSDE1-211ENST00000525970 COL10A1Q03692 680 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms