RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 FDXRP22570 491 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 EEF1GP26641 437 aaKnown RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 KLRC1P26715 233 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 WNT3P56703 355 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 ELAVL1Q15717 326 aaKnown RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 PDCD2Q16342 344 aaPredicted RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 TUBB8Q3ZCM7 444 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 CRB2Q5IJ48 1285 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 FAM160B1Q5W0V3 765 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 PDXDC1Q6P996 788 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 C1QL4Q86Z23 238 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 SYTL1Q8IYJ3 562 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 DNAJC5GQ8N7S2 189 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 PCSK9Q8NBP7 692 aaKnown RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 TMIEQ8NEW7 156 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 TBC1D15Q8TC07 691 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 IPO4Q8TEX9 1081 aaKnown RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 ATXN2LQ8WWM7 1075 aaKnown RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 SKA1Q96BD8 255 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 MPP4Q96JB8 637 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 TOX2Q96NM4 488 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 GDF15Q99988 308 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 VKORC1Q9BQB6 163 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 SPATA5L1Q9BVQ7 753 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 CHST8Q9H2A9 424 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 C9orf78Q9NZ63 289 aaPredicted RBP5.51□□□□□ -1.53
CD44-220ENST00000525688 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 TMX2Q9Y320 296 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 DUSP10Q9Y6W6 482 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 KDM6BO15054 1643 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 LRRIQ1Q96JM4 1722 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 CCDC18Q5T9S5 1454 aa5.51□□□□□ -1.53
CD44-220ENST00000525688 TROQ12816 1431 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 TTC36A6NLP5 189 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 HNRNPDLO14979 420 aaKnown RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 NBNO60934 754 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 TXNP10599 105 aaKnown RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 CKBP12277 381 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 IL1R1P14778 569 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 GCSHP23434 173 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 SLC6A2P23975 617 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 CFPP27918 469 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 MAPK10P53779 464 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 PTTG1IPP53801 180 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 UCP3P55916 312 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 ICA1Q05084 483 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 FOXL1Q12952 345 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 ZNF124Q15973 351 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 CDC37Q16543 378 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 TBC1D10BQ4KMP7 808 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 NAIF1Q69YI7 327 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 TCTN3Q6NUS6 607 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 PGBD2Q6P3X8 592 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 HTR3DQ70Z44 454 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 MED25Q71SY5 747 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 ANKRD23Q86SG2 305 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 ZNF354CQ86Y25 554 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 ELOA2Q8IYF1 753 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 SLC15A4Q8N697 577 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 VGLL2Q8N8G2 317 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 FANCBQ8NB91 859 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 RNF169Q8NCN4 708 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 SLC17A8Q8NDX2 589 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 DNERQ8NFT8 737 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 OR56A3Q8NH54 315 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 CYP2W1Q8TAV3 490 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 IPCEF1Q8WWN9 437 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 MIEF2Q96C03 454 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 GNRHR2Q96P88 292 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 OR14A2Q96R54 314 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 CNPPD1Q9BV87 410 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 STK33Q9BYT3 514 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 ALDH8A1Q9H2A2 487 aaPredicted RBP5.5□□□□□ -1.53
CD44-220ENST00000525688 RETREG1Q9H6L5 497 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 SPON1Q9HCB6 807 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 PPP4R1LQ9P1A2 415 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 POGKQ9P215 609 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 XPR1Q9UBH6 696 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 HDAC9Q9UKV0 1011 aa5.5□□□□□ -1.53
CD44-220ENST00000525688 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
CD44-220ENST00000525688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.49□□□□□ -1.53
CD44-220ENST00000525688 GOLGA6L3A6NEY3 463 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 MYO1CO00159 1063 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 FFAR2O15552 330 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 PLATP00750 562 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 ITGB1P05556 798 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 CYP2C9P11712 490 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 XRCC6P12956 609 aaKnown RBP eCLIP5.49□□□□□ -1.53
CD44-220ENST00000525688 DDIT3P35638 169 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 VIPR2P41587 438 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 GRK6P43250 576 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 CARSP49589 748 aaKnown RBP5.49□□□□□ -1.53
CD44-220ENST00000525688 SLFN5Q08AF3 891 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 TRIM14Q14142 442 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 PUM3Q15397 648 aaKnown RBP5.49□□□□□ -1.53
CD44-220ENST00000525688 DCAF12L1Q5VU92 463 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 METRNLQ641Q3 311 aa5.49□□□□□ -1.53
CD44-220ENST00000525688 TLDC1Q6P9B6 456 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms