RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 CXorf38Q8TB03 319 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 CHFRQ96EP1 664 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 ZNF560Q96MR9 790 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 PI4K2AQ9BTU6 479 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 HPS4Q9NQG7 708 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 GKN1Q9NS71 199 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 AGAP1Q9UPQ3 857 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
NDUFS3-204ENST00000525378 CACNA1AO00555 2505 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 FRYLO94915 3013 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 OTOL1A6NHN0 477 aaPredicted RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 PRR5-ARHGAP8B1AHC4 643 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 HCRTO43612 131 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 TADA3O75528 432 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 GAP43P17677 238 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 ARHGAP8P85298 464 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 PLCB2Q00722 1185 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 LMNB2Q03252 620 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 ITPRIPL2Q3MIP1 535 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 TXNDC8Q6A555 127 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 LONP2Q86WA8 852 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 OSTM1Q86WC4 334 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 FAM83CQ9BQN1 747 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 CBWD1Q9BRT8 395 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 PANK2Q9BZ23 570 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 DDX43Q9NXZ2 648 aaKnown RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 CDV3Q9UKY7 258 aaKnown RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 EXOC7Q9UPT5 735 aa12.63□□□□□ -0.39
NDUFS3-204ENST00000525378 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 DCDC2BA2VCK2 349 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 EXTL3O43909 919 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 PRPF6O94906 941 aaKnown RBP12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 LDHAP00338 332 aaKnown RBP12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 RETP07949 1114 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 CSH1P0DML2 217 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 CSH2P0DML3 217 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 IDEP14735 1019 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 SYT1P21579 422 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 GARTP22102 1010 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 CYP2F1P24903 491 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 AVPR1AP37288 418 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 PNPLA4P41247 253 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 TSPY1Q01534 308 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 BFSP1Q12934 665 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 RUNX3Q13761 415 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 DDR2Q16832 855 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 INTS6LQ5JSJ4 861 aaKnown RBP12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 CSGALNACT2Q8N6G5 542 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 USP28Q96RU2 1077 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 PKMYT1Q99640 499 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 ACBD6Q9BR61 282 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 EBF3Q9H4W6 596 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 PCIF1Q9H4Z3 704 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 OLFML3Q9NRN5 406 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 THG1LQ9NWX6 298 aaKnown RBP12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 SIX4Q9UIU6 781 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
NDUFS3-204ENST00000525378 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 HUS1O60921 280 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 CENPBP07199 599 aaPredicted RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 KRT19P08727 400 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 ARSAP15289 507 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 PDCP20941 246 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 SDHBP21912 280 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 DDX6P26196 483 aaKnown RBP eCLIP12.61□□□□□ -0.397e-7■□□□□ 9.2
NDUFS3-204ENST00000525378 CNR2P34972 360 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 TXLNAP40222 546 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 NFE2Q16621 373 aaPredicted RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 WDR5BQ86VZ2 330 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 SYNPOQ8N3V7 929 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 GLIS3Q8NEA6 775 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 NOC3LQ8WTT2 800 aaKnown RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 CACTINQ8WUQ7 758 aaKnown RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 LEO1Q8WVC0 666 aaPredicted RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 MRPS31Q92665 395 aaKnown RBP12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 RTKNQ9BST9 563 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 MTMR12Q9C0I1 747 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 SEMA4GQ9NTN9 838 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 PANK4Q9NVE7 773 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 ZMYM5Q9UJ78 669 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
NDUFS3-204ENST00000525378 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms