RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 MTMR1Q13613 665 aa14.21□□□□□ -0.13
LRRK1-202ENST00000525284 TAB1Q15750 504 aa14.21□□□□□ -0.13
LRRK1-202ENST00000525284 RESP18Q5W5W9 173 aa14.21□□□□□ -0.13
LRRK1-202ENST00000525284 SCFD2Q8WU76 684 aa14.21□□□□□ -0.13
LRRK1-202ENST00000525284 ENTPD7Q9NQZ7 604 aa14.21□□□□□ -0.13
LRRK1-202ENST00000525284 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
LRRK1-202ENST00000525284 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.13
LRRK1-202ENST00000525284 BLMP54132 1417 aaPredicted RBP14.21□□□□□ -0.14
LRRK1-202ENST00000525284 RNF123Q5XPI4 1314 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 USP17L3A6NCW0 530 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 USP17L4A6NCW7 530 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 TAP1Q03518 808 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 NEDD8Q15843 81 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 NDUFAF6Q330K2 333 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 IPMKQ8NFU5 416 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 ARHGEF26Q96DR7 871 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 PNMA6FA0A0J9YX94 578 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 VWA5AO00534 786 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 PHF2O75151 1096 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 SNRPAP09012 282 aaKnown RBP14.21□□□□□ -0.14
LRRK1-202ENST00000525284 GUCY1A2P33402 732 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 SERPINB8P50452 374 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 DGKDQ16760 1214 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 TSHZ1Q6ZSZ6 1077 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 SYDE1Q6ZW31 735 aaPredicted RBP14.21□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF589Q86UQ0 364 aaPredicted RBP14.21□□□□□ -0.14
LRRK1-202ENST00000525284 PROM2Q8N271 834 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 C18orf25Q96B23 403 aaPredicted RBP14.21□□□□□ -0.14
LRRK1-202ENST00000525284 MAGED4Q96JG8 741 aa14.21□□□□□ -0.14
LRRK1-202ENST00000525284 A0A087X0T9 212 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 H2AFYO75367 372 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 BAIAP3O94812 1187 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 ETFBP38117 255 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 DDR2Q16832 855 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 C2CD6Q53TS8 623 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 SNX30Q5VWJ9 437 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 PEG10Q86TG7 708 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 RMND5AQ9H871 391 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 BTBD7Q9P203 1132 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 COQ6Q9Y2Z9 468 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 SH2B2O14492 632 aaPredicted RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 CYP26A1O43174 497 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 FAM98CQ17RN3 349 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 IZUMO2Q6UXV1 221 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 EFL1Q7Z2Z2 1120 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 PHACTR1Q9C0D0 580 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 COMMD9Q9P000 198 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 WBP11Q9Y2W2 641 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 ADGRA3Q8IWK6 1321 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 IDH3BO43837 385 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 ALDH1A1P00352 501 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 DNAJC3Q13217 504 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 SLC30A5Q8TAD4 765 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 CATSPER2Q96P56 530 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 CCT8P50990 548 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 PRELPP51888 382 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 TRAF3Q13114 568 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 RESTQ13127 1097 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 NFYCQ13952 458 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 LPIN1Q14693 890 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 KNOP1Q1ED39 458 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 TAF2Q6P1X5 1199 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 RAD54LQ92698 747 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF222Q9UK12 451 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 PHGDHO43175 533 aaKnown RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 ATP9AO75110 1047 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 ITIH2P19823 946 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 RGS7P49802 495 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 CACNA2D1P54289 1103 aa14.2□□□□□ -0.14
LRRK1-202ENST00000525284 EPB41L4AQ9HCS5 686 aaPredicted RBP14.2□□□□□ -0.14
LRRK1-202ENST00000525284 TTC26A0AVF1 554 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 FAM47E-STBD1D6RA91 191 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 RPN2P04844 631 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 POLBP06746 335 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 FNTAP49354 379 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ANXA11P50995 505 aaKnown RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 OLFML2AQ68BL7 652 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 LMBRD2Q68DH5 695 aaPredicted RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 TRIM72Q6ZMU5 477 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 AGPAT1Q99943 283 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 MXD3Q9BW11 206 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 PRRG3Q9BZD7 231 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ABCC1P33527 1531 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 TRIM3O75382 744 aaPredicted RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 LBPP18428 481 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 CLEC4GQ6UXB4 293 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ZBTB49Q6ZSB9 765 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 SCUBE1Q8IWY4 988 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 CPA5Q8WXQ8 436 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 PADI4Q9UM07 663 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 DISP1Q96F81 1524 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 USP17L8P0C7I0 530 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 GTF2E2P29084 291 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms