RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
CHKA-203ENST00000525155 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 CSGALNACT2Q8N6G5 542 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 CLDN23Q96B33 292 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 ELSPBP1Q96BH3 223 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
CHKA-203ENST00000525155 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
CHKA-203ENST00000525155 AKAP3O75969 853 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 MICAL2O94851 1124 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 LRG1P02750 347 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 NFICP08651 508 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 DLATP10515 647 aaKnown RBP13.1□□□□□ -0.31
CHKA-203ENST00000525155 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
CHKA-203ENST00000525155 TNNI1P19237 187 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 ELF1P32519 619 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 PNPLA4P41247 253 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 WNT7BP56706 349 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 LILRA4P59901 499 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 TFAMQ00059 246 aaKnown RBP13.1□□□□□ -0.31
CHKA-203ENST00000525155 DUSP4Q13115 394 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 GRM2Q14416 872 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
CHKA-203ENST00000525155 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 VITQ6UXI7 678 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 TMC8Q8IU68 726 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 SUMF1Q8NBK3 374 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 ATAD1Q8NBU5 361 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 SHKBP1Q8TBC3 707 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 PARD3BQ8TEW8 1205 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 NELL1Q92832 810 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 SHDQ96IW2 340 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 PDE11AQ9HCR9 933 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 INTS13Q9NVM9 706 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 DPP3Q9NY33 737 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
CHKA-203ENST00000525155 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 ARNTLO00327 626 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 PIRO00625 290 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 SOAT2O75908 522 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
CHKA-203ENST00000525155 GTF2H1P32780 548 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 VAMP7P51809 220 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 MCCD1P59942 119 aaPredicted RBP13.09□□□□□ -0.31
CHKA-203ENST00000525155 CLDN10P78369 228 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 RBP5P82980 135 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 TEAD2Q15562 447 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 DPCR1Q3MIW9 517 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 STXBP5Q5T5C0 1151 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 ZNF280DQ6N043 979 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 TPRG1Q6ZUI0 275 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 OR10T2Q8NGX3 314 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 ZNF560Q96MR9 790 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 ZNF334Q9HCZ1 680 aaPredicted RBP13.09□□□□□ -0.31
CHKA-203ENST00000525155 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
CHKA-203ENST00000525155 YIPF1Q9Y548 306 aa13.09□□□□□ -0.31
CHKA-203ENST00000525155 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 CAVIN2O95810 425 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 MYL4P12829 197 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 TDGF1P13385 188 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 RFX1P22670 979 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 HOXC13P31276 330 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 CASP4P49662 377 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 PMS1P54277 932 aaKnown RBP13.08□□□□□ -0.32
CHKA-203ENST00000525155 PFKPQ01813 784 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
CHKA-203ENST00000525155 TYRO3Q06418 890 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 BFSP1Q12934 665 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 MYO1EQ12965 1108 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 GPR17Q13304 367 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 GAS6Q14393 721 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 CCDC40Q4G0X9 1142 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 C9orf57Q5W0N0 161 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 TSSK4Q6SA08 328 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 GAREM2Q75VX8 874 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 LRRTM3Q86VH5 581 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 SENP8Q96LD8 212 aa13.08□□□□□ -0.32
CHKA-203ENST00000525155 ZNF512Q96ME7 567 aaPredicted RBP13.08□□□□□ -0.32
CHKA-203ENST00000525155 DUSP9Q99956 384 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms