RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 MDH1BQ5I0G3 518 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 PRSS55Q6UWB4 352 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 CCDC170Q8IYT3 715 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 C12orf29Q8N999 325 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 ZNF606Q8WXB4 792 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 PIK3R5Q8WYR1 880 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 TFAP2BQ92481 460 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 C11orf84Q9BUA3 381 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 OXCT2Q9BYC2 517 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 NKX2-4Q9H2Z4 354 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 CRTAC1Q9NQ79 661 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 C5orf67F2Z3F1 127 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 O00370 1275 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 RB1P06400 928 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 CCDC130P13994 396 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 CHRNB2P17787 502 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 DNAJB2P25686 324 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 CA8P35219 290 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 KIF11P52732 1056 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 FMO1Q01740 532 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 DSG1Q02413 1049 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 GOLGA7BQ2TAP0 167 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 KIAA0319Q5VV43 1072 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 SPRED2Q7Z698 418 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 GLYCTKQ8IVS8 523 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 DCP1BQ8IZD4 617 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 LNX1Q8TBB1 728 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 MYCBPAPQ8TBZ2 947 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 LPIN3Q9BQK8 851 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 ZSWIM1Q9BR11 485 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 SYT11Q9BT88 431 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 PRO3102Q9H379 93 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 ALG13Q9NP73 1137 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 MTRRQ9UBK8 725 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 LZTS1Q9Y250 596 aa16.82■□□□□ 0.28
TSPAN4-213ENST00000524895 MYBPHLA2RUH7 354 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 M0QYV0 167 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CPB1P15086 417 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ADORA2BP29275 332 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 SSTR3P32745 418 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ERVK-21P61565 698 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CYP27A1Q02318 531 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CREMQ03060 361 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 UBE3AQ05086 875 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 MTF1Q14872 753 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CNGA2Q16280 664 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 PPP1R26Q5T8A7 1209 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ARHGAP17Q68EM7 881 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 RAD9BQ6WBX8 426 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 TRIM72Q6ZMU5 477 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 PASD1Q8IV76 773 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC2A14Q8TDB8 520 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 MYLPFQ96A32 169 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CYFIP2Q96F07 1278 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 TMEM209Q96SK2 561 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 MED10Q9BTT4 135 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ZCWPW1Q9H0M4 648 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC28A3Q9HAS3 691 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 MRPL17Q9NRX2 175 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 HESX1Q9UBX0 185 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ADAMTS1Q9UHI8 967 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 TSPAN16Q9UKR8 245 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 PCDHGC3Q9UN70 934 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 SSX2IPQ9Y2D8 614 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 CEP83Q9Y592 693 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 BACE2Q9Y5Z0 518 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 PLXNA4Q9HCM2 1894 aa16.81■□□□□ 0.28
TSPAN4-213ENST00000524895 ATP8B3O60423 1300 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 DDX3XO00571 662 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■■■■□ 19.5
TSPAN4-213ENST00000524895 MICAL2O94851 1124 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 NDUFA10O95299 355 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 ARPP19P56211 112 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 SMAD3P84022 425 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 GFPT1Q06210 699 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 ASTE1Q2TB18 679 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC39A12Q504Y0 691 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 LCLAT1Q6UWP7 414 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 C4orf50Q6ZRC1 276 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 PCED1BQ96HM7 432 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 PKMYT1Q99640 499 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 ENTPD7Q9NQZ7 604 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 SPTLC3Q9NUV7 552 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 CDY1Q9Y6F8 540 aa16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSPAN4-213ENST00000524895 A0A087X0T9 212 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms