RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 GRAMD4Q6IC98 578 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 OLA1Q9NTK5 396 aaKnown RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 FRMPD4Q14CM0 1322 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 KLRG2A4D1S0 409 aaPredicted RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 TRIM66O15016 1216 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 PAX3P23760 479 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 STX1BP61266 288 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 SPDL1Q96EA4 605 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 RNPC3Q96LT9 517 aaKnown RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 TRIM54Q9BYV2 358 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 MED4Q9NPJ6 270 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 OLFML3Q9NRN5 406 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 ZDHHC9Q9Y397 364 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 RASSF3Q86WH2 238 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 RASAL3Q86YV0 1011 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 CHST12Q9NRB3 414 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 C3orf70A6NLC5 250 aaPredicted RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 F9P00740 461 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 EIF3EP60228 445 aaKnown RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.45
BEST1-203ENST00000524877 Q9H521 79 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.85■□□□□ 0.45
BEST1-203ENST00000524877 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.454e-7■■■■■ 133.7
BEST1-203ENST00000524877 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 SPECC1L-ADORA2AF8WAN1 911 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 TOB1P50616 345 aaPredicted RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 GRIN1Q05586 938 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 PKN2Q16513 984 aaKnown RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 MIB1Q86YT6 1006 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 TTC8Q8TAM2 541 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 EXT2Q93063 718 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 PDGFCQ9NRA1 345 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 EFEMP1Q12805 493 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 JADE1Q6IE81 842 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 TMEM86AQ8N2M4 240 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 DDI1Q8WTU0 396 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 RAPGEF5Q92565 580 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 XPO6Q96QU8 1125 aaKnown RBP17.84■□□□□ 0.45
BEST1-203ENST00000524877 SLC12A8A0AV02 714 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 SLURP2P0DP57 97 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 CD52P31358 61 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 UNC45BQ8IWX7 931 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 RPRD1AQ96P16 312 aaPredicted RBP17.84■□□□□ 0.45
BEST1-203ENST00000524877 DDIT4Q9NX09 232 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 CASZ1Q86V15 1759 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 M0QYT0 321 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 BST2Q10589 180 aaKnown RBP17.84■□□□□ 0.45
BEST1-203ENST00000524877 TMEM176AQ96HP8 235 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 UBE2OQ9C0C9 1292 aaKnown RBP17.84■□□□□ 0.45
BEST1-203ENST00000524877 RPTORQ8N122 1335 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 LACTBL1A8MY62 500 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 ASGR1P07306 291 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 SLC9A1P19634 815 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 STARD3Q14849 445 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 TAF11Q15544 211 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 KLHDC7AQ5VTJ3 777 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 TBC1D19Q8N5T2 526 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 HELQQ8TDG4 1101 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 LRRC8CQ8TDW0 803 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 BRI3BPQ8WY22 251 aa17.84■□□□□ 0.45
BEST1-203ENST00000524877 MEIS2O14770 477 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 MLH1P40692 756 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 SMARCD1Q96GM5 515 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 SAYSD1Q9NPB0 183 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 EXOC1LA0A1B0GW35 172 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 EIF4BP23588 611 aaKnown RBP17.83■□□□□ 0.45
BEST1-203ENST00000524877 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.83■□□□□ 0.45
BEST1-203ENST00000524877 TMEM119Q4V9L6 283 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 ATP8A1Q9Y2Q0 1164 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 TLL2Q9Y6L7 1015 aa17.83■□□□□ 0.45
BEST1-203ENST00000524877 CYP3A7-CYP3A51PA0A087WV96 503 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 CYP3A7P24462 503 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 NDUFV1P49821 464 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 EPHB4P54760 987 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 FMR1Q06787 632 aaKnown RBP eCLIP17.83■□□□□ 0.44
BEST1-203ENST00000524877 PDK1Q15118 436 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 USP33Q8TEY7 942 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.44
BEST1-203ENST00000524877 BTBD7Q9P203 1132 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 TIMM13Q9Y5L4 95 aaPredicted RBP17.83■□□□□ 0.44
BEST1-203ENST00000524877 ADH1AP07327 375 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 RALBP11234 206 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 TWF1Q12792 350 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 ORC1Q13415 861 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 C1orf131Q8NDD1 294 aaKnown RBP17.83■□□□□ 0.44
BEST1-203ENST00000524877 GAD1Q99259 594 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 DRC3Q9H069 523 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 UBA6A0AVT1 1052 aaPredicted RBP17.83■□□□□ 0.44
BEST1-203ENST00000524877 PSMD10O75832 226 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 ZC3H18Q86VM9 953 aaKnown RBP17.83■□□□□ 0.44
BEST1-203ENST00000524877 OR6P1Q8NGX9 317 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 ELOVL4Q9GZR5 314 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 ST3GAL5Q9UNP4 418 aa17.83■□□□□ 0.44
BEST1-203ENST00000524877 AKT1P31749 480 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 SCNN1GP51170 649 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 MYL6P60660 151 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 SKOR1P84550 965 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 BHMTQ93088 406 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 FBXO22Q8NEZ5 403 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms