RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 MTMR1Q13613 665 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 TKFCQ3LXA3 575 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 CDHR3Q6ZTQ4 885 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 ALLCQ8N6M5 410 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 EFCAB3Q8N7B9 438 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 PTCD3Q96EY7 689 aaKnown RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 SHCBP1LQ9BZQ2 653 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 TMX4Q9H1E5 349 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 KCND2Q9NZV8 630 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 CYB561D2O14569 222 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 SORBS2O94875 1100 aaKnown RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 FESP07332 822 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 TROVE2P10155 538 aaKnown RBP eCLIP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 ESRRAP11474 423 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 ACADSP16219 412 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 HIRAP54198 1017 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 GEMIN4P57678 1058 aaKnown RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 NOMO3P69849 1222 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 MAIP1Q8WWC4 291 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 USP6NLQ92738 828 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 TAAR1Q96RJ0 339 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 STOML1Q9UBI4 398 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 SMG5Q9UPR3 1016 aaKnown RBP13.84□□□□□ -0.19
CAPN1-202ENST00000524773 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
CAPN1-202ENST00000524773 KIF3CO14782 793 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 TMEM63AO94886 807 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 PYGBP11216 843 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 SLC1A1P43005 524 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.19
CAPN1-202ENST00000524773 DMP1Q13316 513 aaPredicted RBP13.83□□□□□ -0.19
CAPN1-202ENST00000524773 TAF5Q15542 800 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 CWF19L1Q69YN2 538 aaKnown RBP13.83□□□□□ -0.19
CAPN1-202ENST00000524773 CENPUQ71F23 418 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 TREML1Q86YW5 311 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 KATNAL2Q8IYT4 538 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 AGO4Q9HCK5 861 aaKnown RBP13.83□□□□□ -0.19
CAPN1-202ENST00000524773 COQ4Q9Y3A0 265 aa13.83□□□□□ -0.19
CAPN1-202ENST00000524773 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 LPXNO60711 386 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 CCDC22O60826 627 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 BASP1P80723 227 aaKnown RBP13.83□□□□□ -0.2
CAPN1-202ENST00000524773 FAAP100Q0VG06 881 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 CES4AQ5XG92 561 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 SPOCD1Q6ZMY3 1216 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 EGFL6Q8IUX8 553 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 PALM2Q8IXS6 379 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 HIPK4Q8NE63 616 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 STMN2Q93045 179 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 MASTLQ96GX5 879 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 NSL1Q96IY1 281 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.2
CAPN1-202ENST00000524773 CPSF2Q9P2I0 782 aaKnown RBP13.83□□□□□ -0.2
CAPN1-202ENST00000524773 PCSK1NQ9UHG2 260 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 B2RBV5 119 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 FCHO1O14526 889 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 ALOX15BO15296 676 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 VNN1O95497 513 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 ABHD2P08910 425 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 BRD2P25440 801 aaKnown RBP13.83□□□□□ -0.2
CAPN1-202ENST00000524773 PGM1P36871 562 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 NCKAP1LP55160 1127 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 MYBPC2Q14324 1141 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 RBBP5Q15291 538 aaKnown RBP13.83□□□□□ -0.2
CAPN1-202ENST00000524773 FAXCQ5TGI0 409 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 DCUN1D2Q6PH85 259 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 SCARA5Q6ZMJ2 495 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 CCDC33Q8N5R6 958 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 FAM71DQ8N9W8 422 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 BBOF1Q8ND07 529 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 EXD1Q8NHP7 514 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 ACTL9Q8TC94 416 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 JDP2Q8WYK2 163 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 ACAP3Q96P50 834 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 TRIM55Q9BYV6 548 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 MRPL11Q9Y3B7 192 aaKnown RBP13.83□□□□□ -0.2
CAPN1-202ENST00000524773 NUB1Q9Y5A7 615 aa13.83□□□□□ -0.2
CAPN1-202ENST00000524773 GREB1LQ9C091 1923 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-202ENST00000524773 PSTPIP1O43586 416 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 AHCYL1O43865 530 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 CYP1A1P04798 512 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-202ENST00000524773 OTUD4Q01804 1114 aaKnown RBP13.82□□□□□ -0.2
CAPN1-202ENST00000524773 SLC34A1Q06495 639 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 LIN9Q5TKA1 542 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 ZCCHC23Q6ZST2 131 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 UNC45BQ8IWX7 931 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 EMC1Q8N766 993 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 OR5B17Q8NGF7 314 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 FEZF2Q8TBJ5 459 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 CPT1BQ92523 772 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 FNBP1Q96RU3 617 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 SCOCQ9UIL1 159 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 ASB3Q9Y575 518 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 NRXN2Q9P2S2 1712 aa13.82□□□□□ -0.2
CAPN1-202ENST00000524773 PIK3R2O00459 728 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms