RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SOAT2O75908 522 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 EGR2P11161 476 aaPredicted RBP5.71□□□□□ -1.5
PCM1-219ENST00000523540 RPL17P18621 184 aaKnown RBP5.71□□□□□ -1.5
PCM1-219ENST00000523540 VIPR2P41587 438 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 AVPR1BP47901 424 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 GCLCP48506 637 aaPredicted RBP5.71□□□□□ -1.5
PCM1-219ENST00000523540 LONRF3Q496Y0 759 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 C3orf38Q5JPI3 329 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 PCSK4Q6UW60 755 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 MICALCLQ6ZW33 695 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 SLC15A4Q8N697 577 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 FBXO41Q8TF61 875 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 TMEM125Q96AQ2 219 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 TRIM43Q96BQ3 446 aaPredicted RBP5.71□□□□□ -1.5
PCM1-219ENST00000523540 MSLNLQ96KJ4 702 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 WDR11Q9BZH6 1224 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 ZNF518BQ9C0D4 1074 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 TOR3AQ9H497 397 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 ZNF287Q9HBT7 754 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 SACM1LQ9NTJ5 587 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 COL20A1Q9P218 1284 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 AFF4Q9UHB7 1163 aaKnown RBP5.71□□□□□ -1.5
PCM1-219ENST00000523540 OGDHLQ9ULD0 1010 aa5.71□□□□□ -1.5
PCM1-219ENST00000523540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.71□□□□□ -1.5
PCM1-219ENST00000523540 COL4A3Q01955 1670 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 GRID2IPA4D2P6 1211 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 TMEM233B4DJY2 109 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 FOXN1O15353 648 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 ZEB1P37275 1124 aaPredicted RBP5.7□□□□□ -1.5
PCM1-219ENST00000523540 PIK3CBP42338 1070 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 NPTX2P47972 431 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 ZNF134P52741 427 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 WNT3P56703 355 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 IQCB1Q15051 598 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 MRGPRGQ86SM5 289 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 CCDC146Q8IYE0 955 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 FAM9AQ8IZU1 332 aaPredicted RBP5.7□□□□□ -1.5
PCM1-219ENST00000523540 SNX19Q92543 992 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 MESP1Q9BRJ9 268 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 TTYH3Q9C0H2 523 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 INTS13Q9NVM9 706 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 SYBUQ9NX95 663 aa5.7□□□□□ -1.5
PCM1-219ENST00000523540 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 CCDC194A0A1B0GVG4 234 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 MYO1CO00159 1063 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 ATXN1LP0C7T5 689 aaKnown RBP5.69□□□□□ -1.5
PCM1-219ENST00000523540 ITGAMP11215 1152 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 CYP2C9P11712 490 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 NDUFV1P49821 464 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 RAB32Q13637 225 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 C11orf96Q7Z7L8 435 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 LNX2Q8N448 690 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 OR56A3Q8NH54 315 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 LINC00476Q8WZB0 136 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 MOGAT1Q96PD6 335 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 OSBPL9Q96SU4 736 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 A1CFQ9NQ94 594 aaKnown RBP5.69□□□□□ -1.5
PCM1-219ENST00000523540 CHST12Q9NRB3 414 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 PAXBP1Q9Y5B6 917 aa5.69□□□□□ -1.5
PCM1-219ENST00000523540 A0A087X1B8 175 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 A0A0B4J269 797 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 RHPN2P1A8MT19 583 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 F5H697 171 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 F8W8V4 182 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 SRGNP10124 158 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 ZKSCAN1P17029 563 aaPredicted RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 KRT4P19013 534 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 ITGALP20701 1170 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 RPS16P62249 146 aaKnown RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 TUBB3Q13509 450 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 PREPLQ4J6C6 727 aaPredicted RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 SLC44A4Q53GD3 710 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 DCAF12L1Q5VU92 463 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 IL31Q6EBC2 164 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 TMEM108Q6UXF1 575 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 Q6YL49 198 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 ZNF627Q7L945 461 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 GAS2L3Q86XJ1 694 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 VRK3Q8IV63 474 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 FAM109AQ8N4B1 249 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 SSH3Q8TE77 659 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 NEU4Q8WWR8 484 aaPredicted RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 PTCD3Q96EY7 689 aaKnown RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 STRBPQ96SI9 672 aaKnown RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 UNKQ9C0B0 810 aaKnown RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 TBCCD1Q9NVR7 557 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 RGS17Q9UGC6 210 aaPredicted RBP5.68□□□□□ -1.5
PCM1-219ENST00000523540 MAST3O60307 1309 aa5.68□□□□□ -1.5
PCM1-219ENST00000523540 MBD3L4A6NDZ8 208 aaPredicted RBP5.67□□□□□ -1.5
PCM1-219ENST00000523540 MBD3L3A6NE82 208 aaPredicted RBP5.67□□□□□ -1.5
PCM1-219ENST00000523540 PYCARD-AS1I3L0S3 204 aa5.67□□□□□ -1.5
PCM1-219ENST00000523540 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
PCM1-219ENST00000523540 TRIAP1O43715 76 aa5.67□□□□□ -1.5
PCM1-219ENST00000523540 NBPF7P0C2Y1 421 aaPredicted RBP5.67□□□□□ -1.5
PCM1-219ENST00000523540 HKR1P10072 659 aa5.67□□□□□ -1.5
PCM1-219ENST00000523540 XRCC6P12956 609 aaKnown RBP eCLIP5.67□□□□□ -1.5
PCM1-219ENST00000523540 CASP5P51878 434 aa5.67□□□□□ -1.5
PCM1-219ENST00000523540 NEK3P51956 506 aa5.67□□□□□ -1.5
PCM1-219ENST00000523540 HNRNPMP52272 730 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms