RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 PFDN4Q9NQP4 134 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 SIRPGQ9P1W8 387 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 UVRAGQ9P2Y5 699 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 ZNF180Q9UJW8 692 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 SUGT1Q9Y2Z0 365 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 CCNT1O60563 726 aaKnown RBP8.8□□□□□ -1
CSMD1-213ENST00000523488 CLASP2O75122 1294 aaKnown RBP8.8□□□□□ -1
CSMD1-213ENST00000523488 FBXO21O94952 628 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 CYP4A11Q02928 519 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 CAMK2BQ13554 666 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 TGFBIQ15582 683 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 FAM26FQ5R3K3 315 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 KIF6Q6ZMV9 814 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 HEATR3Q7Z4Q2 680 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 LRRC6Q86X45 466 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 ULK2Q8IYT8 1036 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 RFWD2Q8NHY2 731 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 SH3RF3Q8TEJ3 882 aaPredicted RBP8.8□□□□□ -1
CSMD1-213ENST00000523488 DCAKDQ8WVC6 231 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 DDX1Q92499 740 aaKnown RBP8.8□□□□□ -1
CSMD1-213ENST00000523488 WDR83Q9BRX9 315 aaKnown RBP8.8□□□□□ -1
CSMD1-213ENST00000523488 PRDM16Q9HAZ2 1276 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 CROTQ9UKG9 612 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 ADAMTS6Q9UKP5 1117 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 PPM1HQ9ULR3 514 aa8.8□□□□□ -1
CSMD1-213ENST00000523488 WDR91A4D1P6 747 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 IQCA1LA6NCM1 817 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 SDR42E2A6NKP2 422 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 RGS13O14921 159 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 ACTN1P12814 892 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 PCSK6P29122 969 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 IL6STP40189 918 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 VPS41P49754 854 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 LLGL1Q15334 1064 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 EPC2Q52LR7 807 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 DCAF17Q5H9S7 520 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 RIPOR1Q6ZS17 1223 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 CHERPQ8IWX8 916 aaKnown RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 PYROXD1Q8WU10 500 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 FAM81BQ96LP2 452 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 C6orf203Q9P0P8 240 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 RIMS3Q9UJD0 308 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 SYNPO2Q9UMS6 1093 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 DRG1Q9Y295 367 aaKnown RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 SMIM22K7EJ46 135 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 ADCY3O60266 1144 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 BAIAP3O94812 1187 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 FUT4P22083 530 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 KCNJ1P48048 391 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 FAAP100Q0VG06 881 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 HERC4Q5GLZ8 1057 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 LRRC8BQ6P9F7 803 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 C1orf228Q6PIY5 440 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 HELBQ8NG08 1087 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 GRK7Q8WTQ7 553 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 IGSF9Q9P2J2 1179 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 COL16A1Q07092 1604 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 POC1B-GALNT4F8VUJ3 575 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 PIK3CDO00329 1044 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 TGFB1I1O43294 461 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 AKAP3O75969 853 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 PGM3O95394 542 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 RPA3P35244 121 aaPredicted RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 MTTPP55157 894 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 KNOP1Q1ED39 458 aaKnown RBP8.79□□□□□ -1
CSMD1-213ENST00000523488 SLC7A14Q8TBB6 771 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 NUDT12Q9BQG2 462 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 THAP2Q9H0W7 228 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 RABGEF1Q9UJ41 708 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 DOCK1Q14185 1865 aa8.79□□□□□ -1
CSMD1-213ENST00000523488 ARHGAP10A1A4S6 786 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 TOM1O60784 492 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 TNFAIP3P21580 790 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 MARCKSL1P49006 195 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 PDK3Q15120 406 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 MMEL1Q495T6 779 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 C1orf146Q5VVC0 180 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 CES4AQ5XG92 561 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 CYP4F22Q6NT55 531 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 CCDC110Q8TBZ0 833 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 SPOCK2Q92563 424 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 RAB34Q9BZG1 259 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 KLHL4Q9C0H6 718 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 PLGRKTQ9HBL7 147 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 SNX9Q9Y5X1 595 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 SLC37A4O43826 429 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 ADAM23O75077 832 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 GSRP00390 522 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 CA8P35219 290 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 TLR1Q15399 786 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 NADK2Q4G0N4 442 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 CARM1Q86X55 608 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 TREML1Q86YW5 311 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 FAM186BQ8IYM0 893 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 SCAIQ8N9R8 606 aa8.78□□□□□ -1
CSMD1-213ENST00000523488 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
CSMD1-213ENST00000523488 HERPUD2Q9BSE4 406 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms