RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MAGEA4P43358 317 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 NDST1P52848 882 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 PRAMEP78395 509 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 DLK2Q6UY11 383 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 NLRP14Q86W24 1093 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 KIAA1257Q9ULG3 409 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 NID2Q14112 1375 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 PLIN4Q96Q06 1357 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 PPP1R37O75864 691 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 MX2P20592 715 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 RECQLP46063 649 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 CENPCQ03188 943 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 SLC12A1Q13621 1099 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 CAPSQ13938 189 aa13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 DCP1BQ8IZD4 617 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-201ENST00000523390 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 C2CD2LO14523 706 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 EGFRP00533 1210 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 FNTAP49354 379 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 SLC35G1Q2M3R5 365 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 KLC3Q6P597 504 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 FBXO25Q8TCJ0 367 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 KLF6Q99612 283 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 CFAP69A5D8W1 941 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 KITP10721 976 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 AKR1A1P14550 325 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ACAT1P24752 427 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 EPHB2P29323 1055 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PAPOLAP51003 745 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 JADE1Q6IE81 842 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 TBC1D1Q86TI0 1168 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ELMOD1Q8N336 334 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 CCNYL1Q8N7R7 359 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 HNRNPLLQ8WVV9 542 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 RXFP2Q8WXD0 754 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ZNF518BQ9C0D4 1074 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 MAPK13O15264 365 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 GLI1P08151 1106 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PSEN2P49810 448 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 RNF219Q5W0B1 726 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 KIAA0319LQ8IZA0 1049 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 FAM172AQ8WUF8 416 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 BAP1Q92560 729 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 GANQ9H2C0 597 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ASB7Q9H672 318 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 TAS2R14Q9NYV8 317 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PAK5Q9P286 719 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PPME1Q9Y570 386 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 NFASCO94856 1347 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 KLRG2A4D1S0 409 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ESRRAP11474 423 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ODC1P11926 461 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 HSD17B3P37058 310 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 HSDL1Q3SXM5 330 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 IQSEC1Q6DN90 963 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 WDR75Q8IWA0 830 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 ACTRT1Q8TDG2 376 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 EPS8L1Q8TE68 723 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
PCDHGB1-201ENST00000523390 CLGNO14967 610 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 USP2O75604 605 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 POMCP01189 267 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 STX1BP61266 288 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 FSCN1Q16658 493 aaKnown RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 RASSF3Q86WH2 238 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 ATPAF2Q8N5M1 289 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 RMDN1Q96DB5 314 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 L1RE1Q9UN81 338 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 SLC8A2Q9UPR5 921 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 AGTP01019 485 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 BCAT1P54687 386 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 RNF135Q8IUD6 432 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 MTMR14Q8NCE2 650 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 SARS2Q9NP81 518 aaKnown RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 HES2Q9Y543 173 aa13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 C3orf70A6NLC5 250 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 LSM8O95777 96 aaKnown RBP13.67□□□□□ -0.22
PCDHGB1-201ENST00000523390 ATICP31939 592 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms