RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 CLIC2O15247 247 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 ACTN4O43707 911 aaKnown RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 CSH1P0DML2 217 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 CSH2P0DML3 217 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 DLATP10515 647 aaKnown RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 GLULP15104 373 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 PFKFB1P16118 471 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 ATF6P18850 670 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 WEE1P30291 646 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 VIPR2P41587 438 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 CYP2J2P51589 502 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 MLLT6P55198 1093 aaPredicted RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 RPL10AP62906 217 aaKnown RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 CYP24A1Q07973 514 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 PSMD6Q15008 389 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 GPR158Q5T848 1215 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 C1orf228Q6PIY5 440 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 ZC3H14Q6PJT7 736 aaKnown RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 OR5B17Q8NGF7 314 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 CSGALNACT1Q8TDX6 532 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 PAGE5Q96GU1 130 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 SCAND2PQ9GZW5 306 aaPredicted RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 TASP1Q9H6P5 420 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 ZNF334Q9HCZ1 680 aaPredicted RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 EXOC1Q9NV70 894 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 OBP2AQ9NY56 170 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 PIEZO1Q92508 2521 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 KIF26AQ9ULI4 1882 aaPredicted RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 MYO15AQ9UKN7 3530 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 PTPRJQ12913 1337 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 A0A1B0GVL5 298 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 GABRDO14764 452 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 CHADO15335 359 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 EXOC3O60645 756 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 CD72P21854 359 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 ACAT1P24752 427 aaKnown RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 DDX6P26196 483 aaKnown RBP eCLIP11.68□□□□□ -0.54
PVT1-216ENST00000523068 RPS9P46781 194 aaKnown RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 FCHO2Q0JRZ9 810 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 MAPRE1Q15691 268 aaKnown RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 SOWAHAQ2M3V2 549 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 STXBP5Q5T5C0 1151 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 C4orf50Q6ZRC1 276 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 GRAMD1CQ8IYS0 662 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 NKD2Q969F2 451 aaPredicted RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 MSANTD3Q96H12 275 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 FUBP3Q96I24 572 aaKnown RBP eCLIP11.68□□□□□ -0.54
PVT1-216ENST00000523068 CGRRF1Q99675 332 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 SEMA4AQ9H3S1 761 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 TMLHEQ9NVH6 421 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
PVT1-216ENST00000523068 GTF3C4Q9UKN8 822 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 CDH9Q9ULB4 789 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 HPSEQ9Y251 543 aa11.68□□□□□ -0.54
PVT1-216ENST00000523068 CACNA1HO95180 2353 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 ANAPC1Q9H1A4 1944 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 PRR23AA6NEV1 266 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 SOBPA7XYQ1 873 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 LAMTOR5O43504 91 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 KLRC4O43908 158 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 LRRN2O75325 713 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 KIF20AO95235 890 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 FAM163BP0C2L3 166 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 SYKP43405 635 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 CDR1P51861 262 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 AP3M2P53677 418 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 TRPC3Q13507 836 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 NFKBIBQ15653 356 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 CFAP221Q4G0U5 840 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 ARHGAP29Q52LW3 1261 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 LIMS2Q7Z4I7 341 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 OSTM1Q86WC4 334 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 TMEM174Q8WUU8 243 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 CLDN23Q96B33 292 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 CCDC127Q96BQ5 260 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 CCDC34Q96HJ3 373 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 FAM84AQ96KN4 292 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 MMS19Q96T76 1030 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 SPATA6Q9NWH7 488 aaPredicted RBP11.67□□□□□ -0.54
PVT1-216ENST00000523068 MTF2Q9Y483 593 aaPredicted RBP11.67□□□□□ -0.54
PVT1-216ENST00000523068 PIAS3Q9Y6X2 628 aa11.67□□□□□ -0.54
PVT1-216ENST00000523068 HELZP42694 1942 aaKnown RBP11.66□□□□□ -0.54
PVT1-216ENST00000523068 FAM237AA0A1B0GTK4 181 aa11.66□□□□□ -0.54
PVT1-216ENST00000523068 PHACTR2O75167 634 aa11.66□□□□□ -0.54
PVT1-216ENST00000523068 STAU1O95793 577 aaKnown RBP11.66□□□□□ -0.54
PVT1-216ENST00000523068 HMGA1P17096 107 aaKnown RBP11.66□□□□□ -0.54
PVT1-216ENST00000523068 WARSP23381 471 aaKnown RBP11.66□□□□□ -0.54
PVT1-216ENST00000523068 CYP2F1P24903 491 aa11.66□□□□□ -0.54
PVT1-216ENST00000523068 TARSP26639 723 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms