RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PCDHB5Q9Y5E4 795 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 DNAH14Q0VDD8 3507 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 EXTL3O43909 919 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 IL18RAPO95256 599 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 ARSAP15289 507 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 SCP2P22307 547 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 CYP2F1P24903 491 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 NLRP12P59046 1061 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 LMNB2Q03252 620 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 CCDC6Q16204 474 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 NAIF1Q69YI7 327 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 LAIR1Q6GTX8 287 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 CEP68Q76N32 757 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 DCP1BQ8IZD4 617 aaKnown RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 CMTM8Q8IZV2 173 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 PDCL2Q8N4E4 241 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 PDILTQ8N807 584 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 C1orf127Q8N9H9 656 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 USP13Q92995 863 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 HPS3Q969F9 1004 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 ZNF560Q96MR9 790 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 CBWD1Q9BRT8 395 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 IER2Q9BTL4 223 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 PDE11AQ9HCR9 933 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 TRPC7Q9HCX4 862 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 HPS4Q9NQG7 708 aa16.61■□□□□ 0.25
MRPS28-209ENST00000522987 RBAKQ9NYW8 714 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-209ENST00000522987 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 F11P03951 625 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 HMGA1P17096 107 aaKnown RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 ABCD1P33897 745 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 AVPR1AP37288 418 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 TXLNAP40222 546 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 STAT6P42226 847 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 TSPY1Q01534 308 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 POSTNQ15063 836 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 BRSK2Q8IWQ3 736 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 SCN4BQ8IWT1 228 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 CSGALNACT2Q8N6G5 542 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 CELF5Q8N6W0 485 aaKnown RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 GLIS3Q8NEA6 775 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 MTMR12Q9C0I1 747 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 THG1LQ9NWX6 298 aaKnown RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 OBP2AQ9NY56 170 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 GTF3C4Q9UKN8 822 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 EXOC7Q9UPT5 735 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
MRPS28-209ENST00000522987 MYH10P35580 1976 aa16.6■□□□□ 0.25
MRPS28-209ENST00000522987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-209ENST00000522987 GDF9O60383 454 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 HUS1O60921 280 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 GAP43P17677 238 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 PAX3P23760 479 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 CUL4AQ13619 759 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 CCINQ13939 588 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 MAMSTRQ6ZN01 415 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 C2orf15Q8WU43 125 aaKnown RBP16.59■□□□□ 0.25
MRPS28-209ENST00000522987 MSANTD3Q96H12 275 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 USP28Q96RU2 1077 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 CYP2S1Q96SQ9 504 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 PANK4Q9NVE7 773 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 SEL1LQ9UBV2 794 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 SNX9Q9Y5X1 595 aa16.59■□□□□ 0.25
MRPS28-209ENST00000522987 ATP2C2O75185 946 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 TADA3O75528 432 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 TMEM191BP0C7N4 346 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 SYT1P21579 422 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 MLLT6P55198 1093 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-209ENST00000522987 PLCB2Q00722 1185 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 RUNX3Q13761 415 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 FSTL4Q6MZW2 842 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 LONP2Q86WA8 852 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 FAM160A2Q8N612 972 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-209ENST00000522987 MRPS31Q92665 395 aaKnown RBP16.58■□□□□ 0.24
MRPS28-209ENST00000522987 CHFRQ96EP1 664 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 SLC22A12Q96S37 553 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 FBRSL1Q9HCM7 1045 aaKnown RBP16.58■□□□□ 0.24
MRPS28-209ENST00000522987 SEMA4GQ9NTN9 838 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 TDP1Q9NUW8 608 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 SIX4Q9UIU6 781 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 PTPRJQ12913 1337 aa16.58■□□□□ 0.24
MRPS28-209ENST00000522987 PRR5-ARHGAP8B1AHC4 643 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 AXIN1O15169 862 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 EGFP01133 1207 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 RETP07949 1114 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 PNPLA4P41247 253 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
MRPS28-209ENST00000522987 ARHGAP8P85298 464 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 MYL7Q01449 175 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 INTS6LQ5JSJ4 861 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms