RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 NDUFA2O43678 99 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 HEXBP07686 556 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MYBP10242 640 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 VAMP1P23763 118 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ECHS1P30084 290 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 IDUAP35475 653 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 HADHAP40939 763 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 PRKCIP41743 596 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 XIAPP98170 497 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 TFAP4Q01664 338 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MGAT5Q09328 741 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 OR7E24Q6IFN5 339 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ABRAXAS1Q6UWZ7 409 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ECHDC2Q86YB7 292 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 RTKN2Q8IZC4 609 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SPATA5Q8NB90 893 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 PSD4Q8NDX1 1056 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 CFAP57Q96MR6 1250 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ZPBPQ9BS86 351 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 KATNAL1Q9BW62 490 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 BTBD2Q9BX70 525 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MYLK2Q9H1R3 596 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 EBF3Q9H4W6 596 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MRM3Q9HC36 420 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ASNSD1Q9NWL6 643 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 TAS2R7Q9NYW3 318 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 PRKAG2Q9UGJ0 569 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 RSL24D1Q9UHA3 163 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SLC7A8Q9UHI5 535 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 PCOLCE2Q9UKZ9 415 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 HPS5Q9UPZ3 1129 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 AP3M1Q9Y2T2 418 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 STARD13Q9Y3M8 1113 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ILVBLA1L0T0 632 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 CAPN8A6NHC0 703 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SLC9A3R1O14745 358 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 GABBR2O75899 941 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ITGB3P05106 788 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 KRT18P05783 430 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 CAPN1P07384 714 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SELLP14151 372 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 UQCRBP14927 111 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ATP6V1E1P36543 226 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 IARSP41252 1262 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SYKP43405 635 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 YARSP54577 528 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 GFPT1Q06210 699 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 UGT2A3Q6UWM9 527 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 CROCCP2Q86T23 111 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 GALNT13Q8IUC8 556 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 TERB1Q8NA31 727 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 OR52K2Q8NGK3 314 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 RUNDC3BQ96NL0 473 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 C7orf25Q9BPX7 421 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 USB1Q9BQ65 265 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 KCNN2Q9H2S1 579 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 S100A14Q9HCY8 104 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 CEP72Q9P209 647 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF624Q9P2J8 865 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MBD2Q9UBB5 411 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 EPS15L1Q9UBC2 864 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 UBA2Q9UBT2 640 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 SNCAIPQ9Y6H5 919 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 MYH1P12882 1939 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 C1orf232A0A0U1RR37 186 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 FAM172BPA6NC97 362 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SMCO2A6NFE2 343 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PIP5K1CO60331 668 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 GMNNO75496 209 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 TMEM11P17152 192 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 DNAJB2P25686 324 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 GPD2P43304 727 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CDK9P50750 372 aaKnown RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CLCN4P51793 760 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PTPN5P54829 565 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 C21orf59P57076 290 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SRP54P61011 504 aaKnown RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 FCHO2Q0JRZ9 810 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 TOB2Q14106 344 aaPredicted RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 NECTIN1Q15223 517 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 LRRC41Q15345 812 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CNGA2Q16280 664 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SLX4IPQ5VYV7 408 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 NKAIN4Q8IVV8 208 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CCDC33Q8N5R6 958 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF540Q8NDQ6 660 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SLC9A6Q92581 669 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 ANKS1AQ92625 1134 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 NUP88Q99567 741 aaPredicted RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 TM9SF2Q99805 663 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 KLHL25Q9H0H3 589 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 NGRNQ9NPE2 291 aaKnown RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 UCKL1Q9NWZ5 548 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 ATP6V1HQ9UI12 483 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms