RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ATF6P18850 670 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 BMP6P22004 513 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 PPP1R2P41236 205 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 PMS1P54277 932 aaKnown RBP17.53■□□□□ 0.4
PABPC1-221ENST00000522720 FKBP3Q00688 224 aaKnown RBP17.53■□□□□ 0.4
PABPC1-221ENST00000522720 LRRC63Q05C16 580 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 SGSM1Q2NKQ1 1148 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 ZNF667Q5HYK9 610 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 ZC3H3Q8IXZ2 948 aaKnown RBP17.53■□□□□ 0.4
PABPC1-221ENST00000522720 TAF4BQ92750 862 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 FGF14Q92915 247 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 PBXIP1Q96AQ6 731 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 SYT15Q9BQS2 421 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 MRPL45Q9BRJ2 306 aaKnown RBP17.53■□□□□ 0.4
PABPC1-221ENST00000522720 PI4K2AQ9BTU6 479 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 RPP25Q9BUL9 199 aaKnown RBP17.53■□□□□ 0.4
PABPC1-221ENST00000522720 SNX25Q9H3E2 840 aa17.53■□□□□ 0.4
PABPC1-221ENST00000522720 PSMA7O14818 248 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
PABPC1-221ENST00000522720 CCNE1P24864 410 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 CYP2F1P24903 491 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 GTF2H1P32780 548 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 PPP3CAQ08209 521 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 MORC3Q14149 939 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 VEPH1Q14D04 833 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
PABPC1-221ENST00000522720 CFAP221Q4G0U5 840 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 ST13P5Q8NFI4 369 aaPredicted RBP17.52■□□□□ 0.4
PABPC1-221ENST00000522720 OR6B3Q8NGW1 331 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 SHKBP1Q8TBC3 707 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 FAM200AQ8TCP9 573 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 FUBP3Q96I24 572 aaKnown RBP eCLIP17.52■□□□□ 0.4
PABPC1-221ENST00000522720 LPIN3Q9BQK8 851 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 CRTAC1Q9NQ79 661 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 NME7Q9Y5B8 376 aa17.52■□□□□ 0.4
PABPC1-221ENST00000522720 ZNF318Q5VUA4 2279 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 NARSO43776 548 aaKnown RBP17.51■□□□□ 0.39
PABPC1-221ENST00000522720 FGF19O95750 216 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 ASS1P00966 412 aaKnown RBP17.51■□□□□ 0.39
PABPC1-221ENST00000522720 HLA-DRAP01903 254 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 EPB41P11171 864 aaKnown RBP17.51■□□□□ 0.39
PABPC1-221ENST00000522720 SRFP11831 508 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 GJA1P17302 382 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 GCLMP48507 274 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 CCDC142Q17RM4 750 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 C4orf50Q6ZRC1 276 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 GAREM2Q75VX8 874 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
PABPC1-221ENST00000522720 GIPC2Q8TF65 315 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 ZSWIM3Q96MP5 696 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 GPR88Q9GZN0 384 aa17.51■□□□□ 0.39
PABPC1-221ENST00000522720 ZNF334Q9HCZ1 680 aaPredicted RBP17.51■□□□□ 0.39
PABPC1-221ENST00000522720 A0A1W2PRU2 124 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 TRIM49BA6NDI0 452 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 A8MXQ7 604 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 PPP1R3GB7ZBB8 358 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 BIN1O00499 593 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 SLC16A3O15427 465 aaKnown RBP17.5■□□□□ 0.39
PABPC1-221ENST00000522720 ECI2O75521 394 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 P4HA1P13674 534 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 COL9A1P20849 921 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 PIK3CAP42336 1068 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 MAGEA11P43364 429 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 CDH8P55286 799 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 PSMC1P62191 440 aaKnown RBP17.5■□□□□ 0.39
PABPC1-221ENST00000522720 RPL10AP62906 217 aaKnown RBP17.5■□□□□ 0.39
PABPC1-221ENST00000522720 TEAD2Q15562 447 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 FAM78AQ5JUQ0 283 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 FBXL6Q8N531 539 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 MYCBPAPQ8TBZ2 947 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 GPR152Q8TDT2 470 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 TAS1R2Q8TE23 839 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 ELMO3Q96BJ8 720 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 SMYD3Q9H7B4 428 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 TMEM8AQ9HCN3 771 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
PABPC1-221ENST00000522720 WNT16Q9UBV4 365 aa17.5■□□□□ 0.39
PABPC1-221ENST00000522720 PTPRDP23468 1912 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 CLSTN1O94985 981 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 HMGA1P17096 107 aaKnown RBP17.49■□□□□ 0.39
PABPC1-221ENST00000522720 PTPN1P18031 435 aaKnown RBP17.49■□□□□ 0.39
PABPC1-221ENST00000522720 GABRR2P28476 465 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 GPR15P49685 360 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 TAF12Q16514 161 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 CAMK4Q16566 473 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 DDR2Q16832 855 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 KRT39Q6A163 491 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 TANGO2Q6ICL3 276 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 FOXR2Q6PJQ5 311 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 VSTM1Q6UX27 236 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 TRIML1Q8N9V2 468 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 SMARCD2Q92925 531 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 MYLPFQ96A32 169 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 ELSPBP1Q96BH3 223 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 PCED1BQ96HM7 432 aa17.49■□□□□ 0.39
PABPC1-221ENST00000522720 ASB16Q96NS5 453 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms