RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 GTF3C4Q9UKN8 822 aa14.23□□□□□ -0.13
CLK4-210ENST00000522136 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
CLK4-210ENST00000522136 PCDHA11Q9Y5I1 949 aa14.23□□□□□ -0.13
CLK4-210ENST00000522136 EPN1Q9Y6I3 576 aaPredicted RBP14.23□□□□□ -0.13
CLK4-210ENST00000522136 MYH10P35580 1976 aa14.23□□□□□ -0.13
CLK4-210ENST00000522136 RANBP2P49792 3224 aaKnown RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 O00370 1275 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 CLDN5O00501 218 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 NDUFA10O95299 355 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 PCSK1P29120 753 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 BMP8BP34820 402 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 PPM1AP35813 382 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 CTXN3Q4LDR2 81 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 DENND1BQ6P3S1 775 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 RSPO2Q6UXX9 243 aaPredicted RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 DDX53Q86TM3 631 aaKnown RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 VPS52Q8N1B4 723 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 ACRBPQ8NEB7 543 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 SPATA18Q8TC71 538 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 AUTS2Q8WXX7 1259 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 RIN2Q8WYP3 895 aaPredicted RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 CYFIP2Q96F07 1278 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 ACBD6Q9BR61 282 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 ALG13Q9NP73 1137 aaKnown RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 TMLHEQ9NVH6 421 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 TAS2R14Q9NYV8 317 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 TMCO5BA8MYB1 307 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 NRDCO43847 1150 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 CSPG5O95196 566 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 SOD2P04179 222 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 RPL17P18621 184 aaKnown RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 DNAJB2P25686 324 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 ADORA2BP29275 332 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 CNGA2Q16280 664 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 INTS6LQ5JSJ4 861 aaKnown RBP14.22□□□□□ -0.13
CLK4-210ENST00000522136 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 UBA3Q8TBC4 463 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 PDCL3Q9H2J4 239 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 NKX2-4Q9H2Z4 354 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 KIAA1257Q9ULG3 409 aa14.22□□□□□ -0.13
CLK4-210ENST00000522136 MICAL2O94851 1124 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 CYLC1P35663 651 aaPredicted RBP14.21□□□□□ -0.13
CLK4-210ENST00000522136 ARPP19P56211 112 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 TAP1Q03518 808 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 KRT17Q04695 432 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 BMS1Q14692 1282 aaKnown RBP14.21□□□□□ -0.13
CLK4-210ENST00000522136 SLC18A3Q16572 532 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 GOLGA7BQ2TAP0 167 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 SMYD5Q6GMV2 418 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 PAQR9Q6ZVX9 377 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 VPS36Q86VN1 386 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 ZNF677Q86XU0 584 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 TDHQ8IZJ6 230 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 SLC2A14Q8TDB8 520 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 PKMYT1Q99640 499 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 HERC2P3Q9BVR0 1158 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 B3GNT5Q9BYG0 378 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 CERS4Q9HA82 394 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 TSPAN16Q9UKR8 245 aa14.21□□□□□ -0.13
CLK4-210ENST00000522136 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLK4-210ENST00000522136 REXO2Q9Y3B8 237 aaKnown RBP14.21□□□□□ -0.13
CLK4-210ENST00000522136 CARNS1A5YM72 827 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 ADAM12O43184 909 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 MED7O43513 233 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 PLCB3Q01970 1234 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 HS1BP3Q53T59 392 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 NAA35Q5VZE5 725 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 ZNF280DQ6N043 979 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 FAM171BQ6P995 826 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 LCLAT1Q6UWP7 414 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 ANKS3Q6ZW76 656 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 FUKQ8N0W3 1084 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 WDTC1Q8N5D0 677 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 CPA5Q8WXQ8 436 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 PCED1BQ96HM7 432 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 RHOBTB2Q9BYZ6 727 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 ZCWPW1Q9H0M4 648 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
CLK4-210ENST00000522136 NAGPAQ9UK23 515 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 PCDHGC3Q9UN70 934 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 TFR2Q9UP52 801 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 A0A0U1RQJ8 604 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 EIF3CLB5ME19 914 aaKnown RBP14.2□□□□□ -0.14
CLK4-210ENST00000522136 M0QYV0 167 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 DNAJB1P25685 340 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 GLUD2P49448 558 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 TSPY1Q01534 308 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 DSG1Q02413 1049 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 PSMD5Q16401 504 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 CCDC122Q5T0U0 273 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 ARHGAP17Q68EM7 881 aa14.2□□□□□ -0.14
CLK4-210ENST00000522136 ALKBH5Q6P6C2 394 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms