RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 C1orf127Q8N9H9 656 aa22.43■■□□□ 1.18
PABPC1-218ENST00000521865 STKLD1Q8NE28 680 aa22.43■■□□□ 1.18
PABPC1-218ENST00000521865 ZSWIM2Q8NEG5 633 aa22.43■■□□□ 1.18
PABPC1-218ENST00000521865 MRPS31Q92665 395 aaKnown RBP22.43■■□□□ 1.18
PABPC1-218ENST00000521865 PARD6AQ9NPB6 346 aa22.43■■□□□ 1.18
PABPC1-218ENST00000521865 L1RE1Q9UN81 338 aa22.43■■□□□ 1.18
PABPC1-218ENST00000521865 RETP07949 1114 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 CSH1P0DML2 217 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 CSH2P0DML3 217 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 SYT1P21579 422 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 GARTP22102 1010 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 ACAT1P24752 427 aaKnown RBP22.42■■□□□ 1.18
PABPC1-218ENST00000521865 CASP5P51878 434 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 ATXN1P54253 815 aaKnown RBP22.42■■□□□ 1.18
PABPC1-218ENST00000521865 NLRP12P59046 1061 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 SRSF5Q13243 272 aaKnown RBP22.42■■□□□ 1.18
PABPC1-218ENST00000521865 ALCAMQ13740 583 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 WDR44Q5JSH3 913 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 SDHAF4Q5VUM1 108 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 CC2D1AQ6P1N0 951 aaPredicted RBP22.42■■□□□ 1.18
PABPC1-218ENST00000521865 CEP68Q76N32 757 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 SYNPOQ8N3V7 929 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 TTC16Q8NEE8 873 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 PCIF1Q9H4Z3 704 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 OLFML3Q9NRN5 406 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 PANK4Q9NVE7 773 aa22.42■■□□□ 1.18
PABPC1-218ENST00000521865 HRO43593 1189 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 PAPSS2O95340 614 aaPredicted RBP22.41■■□□□ 1.18
PABPC1-218ENST00000521865 TMEM191BP0C7N4 346 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 HMGA1P17096 107 aaKnown RBP22.41■■□□□ 1.18
PABPC1-218ENST00000521865 DDX6P26196 483 aaKnown RBP eCLIP22.41■■□□□ 1.186e-38■□□□□ 11.3
PABPC1-218ENST00000521865 CNR2P34972 360 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 RPL10AP62906 217 aaKnown RBP22.41■■□□□ 1.18
PABPC1-218ENST00000521865 CCINQ13939 588 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 DDR2Q16832 855 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 TXNDC8Q6A555 127 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 TMEM86AQ8N2M4 240 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 LRRC52Q8N7C0 313 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 ACBD6Q9BR61 282 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 CBWD1Q9BRT8 395 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 EBF3Q9H4W6 596 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 TMEM206Q9H813 350 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 TDP1Q9NUW8 608 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 ITGA11Q9UKX5 1188 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 CCL26Q9Y258 94 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 SNX9Q9Y5X1 595 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 TSC2P49815 1807 aa22.41■■□□□ 1.18
PABPC1-218ENST00000521865 K7ESF4 209 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 EXTL3O43909 919 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 PRPF6O94906 941 aaKnown RBP22.4■■□□□ 1.18
PABPC1-218ENST00000521865 F11P03951 625 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 TGM1P22735 817 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 RBP5P82980 135 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 RUNX3Q13761 415 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 INTS6LQ5JSJ4 861 aaKnown RBP22.4■■□□□ 1.18
PABPC1-218ENST00000521865 TRIM68Q6AZZ1 485 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 TMEM150AQ86TG1 271 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 PDILTQ8N807 584 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 USP13Q92995 863 aaPredicted RBP22.4■■□□□ 1.18
PABPC1-218ENST00000521865 FAM84AQ96KN4 292 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 MTMR12Q9C0I1 747 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 KIF9Q9HAQ2 790 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 PDE11AQ9HCR9 933 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 TRPC7Q9HCX4 862 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 C2orf42Q9NWW7 574 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 GTF3C4Q9UKN8 822 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 CEP250Q9BV73 2442 aa22.4■■□□□ 1.18
PABPC1-218ENST00000521865 CYP2F1P24903 491 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 AMPD2Q01433 879 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 GRSF1Q12849 480 aaKnown RBP eCLIP22.39■■□□□ 1.17
PABPC1-218ENST00000521865 SPATA2LQ8IUW3 424 aaPredicted RBP22.39■■□□□ 1.17
PABPC1-218ENST00000521865 CCDC65Q8IXS2 484 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 ADGRF2Q8IZF7 708 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 ANKRD36BP1Q96IX9 119 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 USP28Q96RU2 1077 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 FAM83CQ9BQN1 747 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 RTKNQ9BST9 563 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 FGFBP2Q9BYJ0 223 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 FOXD4L1Q9NU39 408 aa22.39■■□□□ 1.17
PABPC1-218ENST00000521865 UXTQ9UBK9 157 aaPredicted RBP22.39■■□□□ 1.17
PABPC1-218ENST00000521865 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.39■■□□□ 1.17
PABPC1-218ENST00000521865 DCDC2BA2VCK2 349 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 LHX1P48742 406 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 SLC39A14Q15043 492 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 LMBRD2Q68DH5 695 aaPredicted RBP22.38■■□□□ 1.17
PABPC1-218ENST00000521865 STXBP4Q6ZWJ1 553 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 MON1AQ86VX9 555 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 SCN4BQ8IWT1 228 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 GPD1LQ8N335 351 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 LEO1Q8WVC0 666 aaPredicted RBP22.38■■□□□ 1.17
PABPC1-218ENST00000521865 ABCB6Q9NP58 842 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 HPS4Q9NQG7 708 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 SEMA4GQ9NTN9 838 aa22.38■■□□□ 1.17
PABPC1-218ENST00000521865 SCN1AP35498 2009 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 A0A087X0B3 334 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 FRMD3A2A2Y4 597 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 LRP3O75074 770 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 PCSK1P29120 753 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 MYO1EQ12965 1108 aa22.37■■□□□ 1.17
PABPC1-218ENST00000521865 SCARA3Q6AZY7 606 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms