RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 BFSP1Q12934 665 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 TARDBPQ13148 414 aaKnown RBP eCLIP8.32□□□□□ -1.083e-8■■■■□ 26.3
HMBOX1-208ENST00000521516 GAB4Q2WGN9 574 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 HLA-BQ31612 363 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 GLRA4Q5JXX5 417 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 SYCP2LQ5T4T6 812 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 TMTC2Q8N394 836 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 APPL2Q8NEU8 664 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 DNASE2BQ8WZ79 361 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 TSC1Q92574 1164 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 RILPL2Q969X0 211 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 LIN37Q96GY3 246 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 HIC2Q96JB3 615 aa8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 BMP2KQ9NSY1 1161 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 U3KPZ7 1027 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-208ENST00000521516 PODXLO00592 558 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 CDK4P11802 303 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 DDX6P26196 483 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 ARL2P36404 184 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 QARSP47897 775 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 GPR17Q13304 367 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 MTF1Q14872 753 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 SUZ12Q15022 739 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 FAM187BQ17R55 369 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 WDR45BQ5MNZ6 344 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 RGL4Q8IZJ4 473 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 DDX12PQ92771 950 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 PGLYRP2Q96PD5 576 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 MTRQ99707 1265 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 STARD5Q9NSY2 213 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 DUS2Q9NX74 493 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 GMIPQ9P107 970 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 CALCOCO1Q9P1Z2 691 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 WRAP73Q9P2S5 460 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 HSFX1Q9UBD0 423 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 SEPT3Q9UH03 358 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 SH2B2O14492 632 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 N4BP3O15049 544 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 DKC1O60832 514 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 OAZ2O95190 189 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 MYF5P13349 255 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 GABRG2P18507 467 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 GRK6P43250 576 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 KIR2DL1P43626 348 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 NR1H3Q13133 447 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 TMEM150AQ86TG1 271 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 NOSTRINQ8IVI9 506 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 ENGASEQ8NFI3 743 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 FOXJ1Q92949 421 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 CCDC136Q96JN2 1154 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 GCNAQ96QF7 691 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 PRMT7Q9NVM4 692 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 CENPEQ02224 2701 aa8.31□□□□□ -1.08
HMBOX1-208ENST00000521516 SMIM28A0A1B0GU29 152 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 TTLL13PA6NNM8 815 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 ZNF217O75362 1048 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 GLRA2P23416 452 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 LIFRP42702 1097 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 CLDN6P56747 220 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 ZNF77Q15935 545 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 CCDC157Q569K6 752 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 XKR4Q5GH76 650 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 C6orf132Q5T0Z8 1188 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 SFTPA1Q8IWL2 248 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 REXO1Q8N1G1 1221 aaKnown RBP8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 EXD3Q8N9H8 876 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 ZMYND12Q9H0C1 365 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 IL25Q9H293 177 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 PCDHB8Q9UN66 801 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 SLC27A5Q9Y2P5 690 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 MTMR11A4FU01 709 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 CCDC69A6NI79 296 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 HIP1O00291 1037 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 EML1O00423 815 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 C1SP09871 688 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 OR4Q2P0C623 313 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 MAOBP27338 520 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 IFNAR2P48551 515 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 PCBP4P57723 403 aaKnown RBP8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 USP4Q13107 963 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 Q4G0T1 1027 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 USP49Q70CQ1 688 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 C4orf19Q8IY42 314 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 TTC9BQ8N6N2 239 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 MAB21L3Q8N8X9 362 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 GDAQ9Y2T3 454 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 WNT6Q9Y6F9 365 aa8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
HMBOX1-208ENST00000521516 ZFHX3Q15911 3703 aa8.29□□□□□ -1.08
HMBOX1-208ENST00000521516 ANK1P16157 1881 aa8.29□□□□□ -1.08
HMBOX1-208ENST00000521516 OR6C75A6NL08 312 aa8.29□□□□□ -1.08
HMBOX1-208ENST00000521516 TRIM66O15016 1216 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms