RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GIPC2Q8TF65 315 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 DEPDC1BQ8WUY9 529 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 KBTBD7Q8WVZ9 684 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 DNASE1L2Q92874 299 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 PI4K2AQ9BTU6 479 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 MKNK1Q9BUB5 465 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 ATXN3LQ9H3M9 355 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 SLITRK6Q9H5Y7 841 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 IL21Q9HBE4 155 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 ABCB6Q9NP58 842 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 GTF3C4Q9UKN8 822 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 RHOBTB3O94955 611 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 ZNF202O95125 648 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 WEE1P30291 646 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 CLDN10P78369 228 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 DPYDQ12882 1025 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 GRM2Q14416 872 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 STXBP5Q5T5C0 1151 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 PJA1Q8NG27 643 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 PLEKHO2Q8TD55 490 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 IRF7Q92985 503 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 OSBPL6Q9BZF3 934 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 FOXQ1Q9C009 403 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 GOLPH3LQ9H4A5 285 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 BRD9Q9H8M2 597 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 GDPD2Q9HCC8 539 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 TRPV5Q9NQA5 729 aa18.28■□□□□ 0.52
SQLE-205ENST00000521232 CACNA1IQ9P0X4 2223 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 DENND4CQ5VZ89 1909 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 MYBPHLA2RUH7 354 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 HEPACAM2A8MVW5 462 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 STAU1O95793 577 aaKnown RBP18.27■□□□□ 0.52
SQLE-205ENST00000521232 DCNP07585 359 aaKnown RBP18.27■□□□□ 0.52
SQLE-205ENST00000521232 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 HMGA1P17096 107 aaKnown RBP18.27■□□□□ 0.52
SQLE-205ENST00000521232 WARSP23381 471 aaKnown RBP18.27■□□□□ 0.52
SQLE-205ENST00000521232 CYP2F1P24903 491 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 LMO2P25791 158 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 CDC25CP30307 473 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 NUCB2P80303 420 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 TAF12Q16514 161 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 CFAP221Q4G0U5 840 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 ARHGAP15Q53QZ3 475 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 GPR158Q5T848 1215 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 ARID3BQ8IVW6 561 aaPredicted RBP18.27■□□□□ 0.52
SQLE-205ENST00000521232 PARD3BQ8TEW8 1205 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 FUBP3Q96I24 572 aaKnown RBP eCLIP18.27■□□□□ 0.52
SQLE-205ENST00000521232 NELL2Q99435 816 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 TASP1Q9H6P5 420 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 FAM86C1Q9NVL1 165 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 CDH9Q9ULB4 789 aa18.27■□□□□ 0.52
SQLE-205ENST00000521232 MIA3Q5JRA6 1907 aa18.27■□□□□ 0.51
SQLE-205ENST00000521232 NCANO14594 1321 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 HCRTO43612 131 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 TACC1O75410 805 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 CSH1P0DML2 217 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 CSH2P0DML3 217 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 GLULP15104 373 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 GDI1P31150 447 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 ATICP31939 592 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 CASP4P49662 377 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 GPR15P49685 360 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 AP3M2P53677 418 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 RPL10AP62906 217 aaKnown RBP18.26■□□□□ 0.51
SQLE-205ENST00000521232 ANGPT1Q15389 498 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 CCDC47Q96A33 483 aaKnown RBP18.26■□□□□ 0.51
SQLE-205ENST00000521232 RSPRY1Q96DX4 576 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 MMS19Q96T76 1030 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 HEBP1Q9NRV9 189 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 ZMYM5Q9UJ78 669 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 TRAF3IP3Q9Y228 551 aa18.26■□□□□ 0.51
SQLE-205ENST00000521232 NUP210Q8TEM1 1887 aaPredicted RBP18.26■□□□□ 0.51
SQLE-205ENST00000521232 WDR87Q6ZQQ6 2873 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 COL4A3Q01955 1670 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 SHISA7A6NL88 538 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 FAM170BA6NMN3 283 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
SQLE-205ENST00000521232 PROB1E7EW31 1015 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 ZNF263O14978 683 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 ATP2C2O75185 946 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 KIF20AO95235 890 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 F11P03951 625 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 NR3C1P04150 777 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 CD72P21854 359 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 FCHO2Q0JRZ9 810 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 TRPC3Q13507 836 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 KCNB1Q14721 858 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 DDR2Q16832 855 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 CCDC142Q17RM4 750 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 WDR72Q3MJ13 1102 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 TPRG1Q6ZUI0 275 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 TMEM150AQ86TG1 271 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 SPATA2LQ8IUW3 424 aaPredicted RBP18.25■□□□□ 0.51
SQLE-205ENST00000521232 GCNAQ96QF7 691 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 SYT15Q9BQS2 421 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 SLC46A2Q9BY10 475 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 XYLT2Q9H1B5 865 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 VRTNQ9H8Y1 702 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 LTB4R2Q9NPC1 389 aa18.25■□□□□ 0.51
SQLE-205ENST00000521232 OBP2AQ9NY56 170 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms