RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 MCM9Q9NXL9 1143 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 COL20A1Q9P218 1284 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 MAGEC2Q9UBF1 373 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 SWAP70Q9UH65 585 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 PPT2Q9UMR5 302 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 USP18Q9UMW8 372 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 PLAAQ9Y263 795 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 SIT1Q9Y3P8 196 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 PCDHB12Q9Y5F1 795 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 BSNQ9UPA5 3926 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 LOXHD1Q8IVV2 1947 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 PNMA6EA0A0J9YXQ4 647 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 MEIS3P2A8K0S8 358 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 ANHXE9PGG2 379 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 TBC1D4O60343 1298 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 MGEA5O60502 916 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 PLA2G6O60733 806 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 LRP3O75074 770 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 FGF18O76093 207 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 SLPIP03973 132 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 PDGFRBP09619 1106 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 GLI4P10075 376 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 NOVP48745 357 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 GYS2P54840 703 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 CORO7P57737 925 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 SP2Q02086 613 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 UBE3AQ05086 875 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 ITIH3Q06033 890 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 SQSTM1Q13501 440 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 PPP2R5BQ15173 497 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 CTR9Q6PD62 1173 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 C19orf48Q6RUI8 117 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 CCDC81Q6ZN84 652 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 RUFY4Q6ZNE9 571 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 RPAP2Q8IXW5 612 aaPredicted RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 DHX37Q8IY37 1157 aaKnown RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 REXO1Q8N1G1 1221 aaKnown RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 MRPL43Q8N983 215 aaKnown RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 TDRD5Q8NAT2 981 aaKnown RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 RBBP8NLQ8NC74 664 aaPredicted RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 GMCL1P1Q8NEA9 526 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 SCFD2Q8WU76 684 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 CPA5Q8WXQ8 436 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 TBC1D5Q92609 795 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 SLC6A18Q96N87 628 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 NOL10Q9BSC4 688 aaKnown RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 FZD8Q9H461 694 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 RNPEPQ9H4A4 650 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 FEM1BQ9UK73 627 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 CA14Q9ULX7 337 aa4.49□□□□□ -1.69
VPS13B-208ENST00000521037 UTP20O75691 2785 aaKnown RBP4.49□□□□□ -1.69
VPS13B-208ENST00000521037 FNDC1Q4ZHG4 1894 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 C2orf16Q68DN1 1984 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 CCDC194A0A1B0GVG4 234 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 C2orf71A6NGG8 1288 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 C9IYK1 514 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 CAND2O75155 1236 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 PLATP00750 562 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 RETP07949 1114 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 GSTM1P09488 218 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ALAS1P13196 640 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 EPCAMP16422 314 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 PDE6AP16499 860 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ACVRL1P37023 503 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 MTHFRP42898 656 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 MASP1P48740 699 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ZNF165P49910 485 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 CSTF1Q05048 431 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 SRSF5Q13243 272 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 WDR43Q15061 677 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 SF3A2Q15428 464 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 CDSNQ15517 529 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 TCEA2Q15560 299 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 FXNQ16595 210 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 LPAL2Q16609 132 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 COL28A1Q2UY09 1125 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 TKFCQ3LXA3 575 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 HSDL1Q3SXM5 330 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 SEZ6Q53EL9 994 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ANKRD39Q53RE8 183 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 FBXO47Q5MNV8 452 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 RARS2Q5T160 578 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 PLPP4Q5VZY2 271 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 GPR149Q86SP6 731 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 PROSER1Q86XN7 944 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 LINC00482Q8N8I6 264 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 C19orf47Q8N9M1 422 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ST13P5Q8NFI4 369 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 SSH1Q8WYL5 1049 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ZCCHC14Q8WYQ9 949 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 APBB2Q92870 758 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 EAF2Q96CJ1 260 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 C8orf49Q96NF6 230 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 FERD3LQ96RJ6 166 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 MYADMQ96S97 322 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ALG1Q9BT22 464 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 VN1R3Q9BXE9 311 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms