RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 VILLO15195 856 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SLC22A1O15245 554 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 MAGEB2O15479 319 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 RAD51CO43502 376 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 CCDC22O60826 627 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 OPHN1O60890 802 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 CSDE1O75534 798 aaKnown RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 DGKIO75912 1065 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 FBXO21O94952 628 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SHBGP04278 402 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SRGNP10124 158 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 FDPSP14324 419 aaKnown RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 GM2AP17900 193 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 GNA11P29992 359 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 EPS15P42566 896 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 KRT6CP48668 564 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 HNRNPFP52597 415 aaKnown RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 THOP1P52888 689 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 MECOMQ03112 1051 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 UBXN1Q04323 297 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 PPARAQ07869 468 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 MED21Q13503 144 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 KCNJ12Q14500 433 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 TTLL4Q14679 1199 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 HERC4Q5GLZ8 1057 aaPredicted RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 FAM209AQ5JX71 171 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 WDR45BQ5MNZ6 344 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 ZFYVE27Q5T4F4 411 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SIGIRRQ6IA17 410 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 NFRKBQ6P4R8 1299 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 AAGABQ6PD74 315 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 RGS9BPQ6ZS82 235 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 VPS37DQ86XT2 251 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 FAM20CQ8IXL6 584 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 ANGPTL6Q8NI99 470 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 MDM1Q8TC05 714 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 ZNF507Q8TCN5 953 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 GIPC3Q8TF64 312 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 BORCS5Q969J3 196 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SDCCAG3Q96C92 435 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SLC7A6OSQ96CW6 309 aaPredicted RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 NMD3Q96D46 503 aaKnown RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 PHACTR3Q96KR7 559 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 RUNDC3BQ96NL0 473 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 PPP1R10Q96QC0 940 aaKnown RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 LRRC37BQ96QE4 947 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SEZ6LQ9BYH1 1024 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 NUF2Q9BZD4 464 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 C12orf10Q9HB07 376 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 USP29Q9HBJ7 922 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 SLC38A10Q9HBR0 1119 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 COMMD8Q9NX08 183 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 POLR3KQ9Y2Y1 108 aaPredicted RBP9.09□□□□□ -0.95
SHPRH-208ENST00000520752 TULP4Q9NRJ4 1543 aa9.09□□□□□ -0.95
SHPRH-208ENST00000520752 ARHGAP23Q9P227 1491 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ARHGEF28Q8N1W1 1705 aaKnown RBP9.08□□□□□ -0.96
SHPRH-208ENST00000520752 PITPNM2Q9BZ72 1349 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 CLTCQ00610 1675 aaKnown RBP9.08□□□□□ -0.96
SHPRH-208ENST00000520752 LOC105371267A0A1B0GV96 52 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 SSU72P8A0A1W2PR75 194 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 MACROD2A1Z1Q3 448 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 BTNL10A8MVZ5 291 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 TCP11X1B4DZS4 312 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 KIF28PB7ZC32 967 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 GOLGA8MH3BSY2 632 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 DDX3XO00571 662 aaKnown RBP eCLIP9.08□□□□□ -0.96
SHPRH-208ENST00000520752 CPLX1O14810 134 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ALOX15BO15296 676 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ADAM23O75077 832 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 PHF2O75151 1096 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 FKBP6O75344 327 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ATE1O95260 518 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 BMP15O95972 392 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 BMP3P12645 472 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ATICP31939 592 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 IL13P35225 146 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 SOX9P48436 509 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 PCYT1AP49585 367 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 HSD17B4P51659 736 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 CHN2P52757 468 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 WASHC5Q12768 1159 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 C15orf59Q2T9L4 293 aaPredicted RBP9.08□□□□□ -0.96
SHPRH-208ENST00000520752 MYLK3Q32MK0 819 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 SLC45A4Q5BKX6 768 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 C6orf163Q5TEZ5 329 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 KLHDC7AQ5VTJ3 777 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 CDPF1Q6NVV7 123 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ITIH5Q86UX2 942 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 ECHDC2Q86YB7 292 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 LURAP1LQ8IV03 231 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 TERB1Q8NA31 727 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 MINDY2Q8NBR6 621 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.08□□□□□ -0.96
SHPRH-208ENST00000520752 UHMK1Q8TAS1 419 aaKnown RBP9.08□□□□□ -0.96
SHPRH-208ENST00000520752 CALML6Q8TD86 181 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 NRG4Q8WWG1 115 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 CCDC138Q96M89 665 aa9.08□□□□□ -0.96
SHPRH-208ENST00000520752 TCEANC2Q96MN5 208 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms