RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 H7C4K7 107 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 HCRTO43612 131 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 RTN2O75298 545 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 MICAL2O94851 1124 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 H2AFZP0C0S5 128 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 GZMAP12544 262 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 PTPN1P18031 435 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 LMO2P25791 158 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 SSTR3P32745 418 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 NSFP46459 744 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 BCAT1P54687 386 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 SLC8A3P57103 927 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 NOMO3P69849 1222 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 CENPCQ03188 943 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 USP41Q3LFD5 358 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 CTXN3Q4LDR2 81 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 ARHGAP29Q52LW3 1261 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 C9orf50Q5SZB4 431 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 KIAA1841Q6NSI8 718 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 LCLAT1Q6UWP7 414 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 ANKS3Q6ZW76 656 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 H2AFVQ71UI9 128 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 TMEM173Q86WV6 379 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 PALB2Q86YC2 1186 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 DCP1BQ8IZD4 617 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 CCAR2Q8N163 923 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 CRYBG2Q8N1P7 616 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 C1orf131Q8NDD1 294 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 OLIG1Q8TAK6 271 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 BCL7CQ8WUZ0 217 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 CTNNBL1Q8WYA6 563 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 CYFIP2Q96F07 1278 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 NOX5Q96PH1 765 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 PCDHB18PQ96TA0 734 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 MED10Q9BTT4 135 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 TTPALQ9BTX7 342 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 OXCT2Q9BYC2 517 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 GPR62Q9BZJ7 368 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 ZNF518BQ9C0D4 1074 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 TRMT1Q9NXH9 659 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 TSPAN16Q9UKR8 245 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 INTUQ9ULD6 942 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 NENFQ9UMX5 172 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 REXO2Q9Y3B8 237 aaKnown RBP9.5□□□□□ -0.89
CSMD1-208ENST00000520561 ZNF263O14978 683 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 KRT86O43790 486 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 OAZ2O95190 189 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 SOD2P04179 222 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 CYP1A1P04798 512 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 URODP06132 367 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 TMEM253P0C7T8 217 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 CCDC130P13994 396 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 ADORA2BP29275 332 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 CDH5P33151 784 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 CTNNB1P35222 781 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 GLUD2P49448 558 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 KRT17Q04695 432 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 BST2Q10589 180 aaKnown RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 KIF5AQ12840 1032 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 SHHQ15465 462 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 PPP1R26Q5T8A7 1209 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 ACAD10Q6JQN1 1059 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 DENND1BQ6P3S1 775 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 C4orf50Q6ZRC1 276 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 C17orf53Q8N3J3 647 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 C12orf29Q8N999 325 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 OR10T2Q8NGX3 314 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 MYCBPAPQ8TBZ2 947 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 SLC2A14Q8TDB8 520 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 IPO4Q8TEX9 1081 aaKnown RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 CLP1Q92989 425 aaKnown RBP9.49□□□□□ -0.89
CSMD1-208ENST00000520561 MYLPFQ96A32 169 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 PPP1R13BQ96KQ4 1090 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 RTP3Q9BQQ7 232 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 ZSWIM1Q9BR11 485 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 C11orf70Q9BRQ4 267 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 MIS12Q9H081 205 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 LHX5Q9H2C1 402 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 SYNCQ9H7C4 482 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 KCND1Q9NSA2 647 aa9.49□□□□□ -0.89
CSMD1-208ENST00000520561 ANKRD62A6NC57 917 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ESPNB1AK53 854 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ATP2C2O75185 946 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CAPN15O75808 1086 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 FGF18O76093 207 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 FTLP02792 175 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CALB1P05937 261 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CFHP08603 1231 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 FAM200BP0CF97 657 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 MYBL1P10243 752 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 UNGP13051 313 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CPB1P15086 417 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ABCB4P21439 1286 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 SNX16P57768 344 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 PLCB3Q01970 1234 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CREMQ03060 361 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 PSMD5Q16401 504 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 NFE2Q16621 373 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms