RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 GP2P55259 537 aaKnown RBP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 MCL1Q07820 350 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PPP3CAQ08209 521 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM62Q0P6H9 643 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PRPF4BQ13523 1007 aaKnown RBP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM14Q14142 442 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 KIZQ2M2Z5 673 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 CBWD6Q4V339 395 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 DCAF17Q5H9S7 520 aaPredicted RBP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 CBWD3Q5JTY5 395 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 CBWD5Q5RIA9 395 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 ATF7IP2Q5U623 682 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 EEF1DP3Q658K8 133 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 RNF180Q86T96 592 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 NME8Q8N427 588 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 LMO3Q8TAP4 145 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PARD3BQ8TEW8 1205 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 SH3TC2Q8TF17 1288 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 FBLIM1Q8WUP2 373 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PANX2Q96RD6 677 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM213AQ9BRX8 229 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 CRACR2AQ9BSW2 395 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 MSTO1Q9BUK6 570 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 OSBPL1AQ9BXW6 950 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 KIAA1586Q9HCI6 787 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 SIX2Q9NPC8 291 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 AGPAT5Q9NUQ2 364 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 PRMT7Q9NVM4 692 aaPredicted RBP8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 ANKFY1Q9P2R3 1169 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 TNFSF13BQ9Y275 285 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 CNTNAP2Q9UHC6 1331 aa8.5□□□□□ -1.05
CTHRC1-203ENST00000520337 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 A0A1B0GUA9 196 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 A0A1W2PQJ5 194 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 ZNF233A6NK53 670 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 LRRIQ3A6PVS8 624 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 RBAK-RBAKDNI3L0D1 243 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 CLDN3O15551 220 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 TSPAN1O60635 241 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 CABYRO75952 493 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 F13BP05160 661 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 UQCRHP07919 91 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 SKILP12757 684 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 DARSP14868 501 aaKnown RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 ARF4P18085 180 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 SLC9A1P19634 815 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 HOXA11P31270 313 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 GTF2F1P35269 517 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 KRT9P35527 623 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 APBA1Q02410 837 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 MAP7Q14244 749 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 PSMD6Q15008 389 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 TCERG1LQ5VWI1 586 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 TAF2Q6P1X5 1199 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 MPZL3Q6UWV2 235 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 GBP6Q6ZN66 633 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 C15orf39Q6ZRI6 1047 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 RPAINQ86UA6 219 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 SERINC5Q86VE9 423 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 MYRIPQ8NFW9 859 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 KIAA1524Q8TCG1 905 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM40Q8WWA1 233 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 CCDC127Q96BQ5 260 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 IQCDQ96DY2 449 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 CCDC51Q96ER9 411 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 DNAJC7Q99615 494 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 LSM14BQ9BX40 385 aaKnown RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 GCOM2Q9BZD3 368 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 EDEM3Q9BZQ6 932 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM117Q9H0C3 514 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 GANQ9H2C0 597 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 PDZD7Q9H5P4 517 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 MMRN2Q9H8L6 949 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 PLCB1Q9NQ66 1216 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 PAK6Q9NQU5 681 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 RAD18Q9NS91 495 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 SPTLC3Q9NUV7 552 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 ACTL7BQ9Y614 415 aa8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 KIAA0100Q14667 2235 aaKnown RBP8.49□□□□□ -1.05
CTHRC1-203ENST00000520337 MYH10P35580 1976 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 SCN1AP35498 2009 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 OGTO15294 1046 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 P4HA2O15460 535 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 WNT11O96014 354 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 LDHAP00338 332 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CHRNA1P02708 482 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CTSBP07858 339 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 ACTN1P12814 892 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 FOSL1P15407 271 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM21P19474 475 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 FGFR4P22455 802 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 EIF4BP23588 611 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 GTF2H1P32780 548 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 TNFSF9P41273 254 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 GCLMP48507 274 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms