RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 ZBBXA8MT70 800 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 GOLGA6L22H0YM25 854 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 K7ERI5 159 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 GDF9O60383 454 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ICMTO60725 284 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ERLIN2O94905 339 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 OAZ2O95190 189 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 SOD2P04179 222 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ATP2B1P20020 1258 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ANXA13P27216 316 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 CYP2C18P33260 490 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 PDE6CP51160 858 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 YARSP54577 528 aaKnown RBP3.07□□□□□ -1.92
MCF2-208ENST00000519895 EPHA5P54756 1037 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ITIH3Q06033 890 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 GPM6BQ13491 265 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 MORC3Q14149 939 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 CTTNQ14247 550 aaKnown RBP3.07□□□□□ -1.92
MCF2-208ENST00000519895 ZNF268Q14587 947 aaPredicted RBP3.07□□□□□ -1.92
MCF2-208ENST00000519895 E2F5Q15329 346 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 DUSP6Q16828 381 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 KNOP1Q1ED39 458 aaKnown RBP3.07□□□□□ -1.92
MCF2-208ENST00000519895 TMEM63BQ5T3F8 832 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ENOSF1Q7L5Y1 443 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 CATSPER4Q7RTX7 472 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 HAUS6Q7Z4H7 955 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 JAZF1Q86VZ6 243 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 UNC93AQ86WB7 457 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 TSC1Q92574 1164 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 FUBP3Q96I24 572 aaKnown RBP eCLIP3.07□□□□□ -1.92
MCF2-208ENST00000519895 SUSD3Q96L08 255 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ZNF560Q96MR9 790 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 REEP2Q9BRK0 252 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 ANP32EQ9BTT0 268 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 RUSC1Q9BVN2 902 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 BHMT2Q9H2M3 363 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 KCTD10Q9H3F6 313 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 TRPV4Q9HBA0 871 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 CNTN6Q9UQ52 1028 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 AKT3Q9Y243 479 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 TELO2Q9Y4R8 837 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 PCDHB2Q9Y5E7 798 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 RP1L1Q8IWN7 2480 aaPredicted RBP3.07□□□□□ -1.92
MCF2-208ENST00000519895 PLXNB3Q9ULL4 1909 aa3.07□□□□□ -1.92
MCF2-208ENST00000519895 A0A087WZ62 844 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 MYMKA6NI61 221 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 CFAP99D6REC4 459 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 PIRO00625 290 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 DDAH2O95865 285 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 ARF4P18085 180 aaPredicted RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 WARSP23381 471 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 SYKP43405 635 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 RPS9P46781 194 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 YWHAEP62258 255 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 KRT17Q04695 432 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 DLX2Q07687 328 aaPredicted RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 STIM1Q13586 685 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 RAB33AQ14088 237 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 NR6A1Q15406 480 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 STILQ15468 1287 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 MAPRE1Q15691 268 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 FAM26FQ5R3K3 315 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 LRRC69Q6ZNQ3 347 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 INTS8Q75QN2 995 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 RAB11FIP4Q86YS3 637 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 FAM114A1Q8IWE2 563 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 GPD1LQ8N335 351 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 RNF149Q8NC42 400 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 APPL2Q8NEU8 664 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 ADAMTS14Q8WXS8 1223 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 SYAP1Q96A49 352 aaPredicted RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 LENG1Q96BZ8 264 aaPredicted RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 ACAP3Q96P50 834 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 CGRRF1Q99675 332 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 FDXACB1Q9BRP7 624 aaPredicted RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 GPR88Q9GZN0 384 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 CDT1Q9H211 546 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 ACBD3Q9H3P7 528 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 CLSTN2Q9H4D0 955 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 NXF3Q9H4D5 531 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 THAP9Q9H5L6 903 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 AGO3Q9H9G7 860 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 PANK4Q9NVE7 773 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 IL37Q9NZH6 218 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 RGL1Q9NZL6 768 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 MTRRQ9UBK8 725 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 PUF60Q9UHX1 559 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 DMGDHQ9UI17 866 aaKnown RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 LCMT1Q9UIC8 334 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 DCTN4Q9UJW0 460 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 LRFN2Q9ULH4 789 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 SIT1Q9Y3P8 196 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 IPPQ9Y573 584 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 PTPRJQ12913 1337 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 COL4A2P08572 1712 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 PTPRDP23468 1912 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 DENND3A2RUS2 1198 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 VPS37CA5D8V6 355 aaPredicted RBP3.06□□□□□ -1.92
MCF2-208ENST00000519895 C2CD2LO14523 706 aa3.06□□□□□ -1.92
MCF2-208ENST00000519895 HSP90AA1P07900 732 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms