RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 C1orf127Q8N9H9 656 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 TTC8Q8TAM2 541 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
PVT1-208ENST00000519481 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 ZFYVE19Q96K21 471 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
PVT1-208ENST00000519481 ACBD6Q9BR61 282 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 PI4K2AQ9BTU6 479 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 PCIF1Q9H4Z3 704 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 KIF9Q9HAQ2 790 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 ABCB6Q9NP58 842 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 GTSE1Q9NYZ3 720 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
PVT1-208ENST00000519481 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 CEP250Q9BV73 2442 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 DMDP11532 3685 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 TCHHQ07283 1943 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 FRMD3A2A2Y4 597 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 PRR5-ARHGAP8B1AHC4 643 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 STX6O43752 255 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
PVT1-208ENST00000519481 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 TNNC2P02585 160 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 CNR2P34972 360 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 CASP5P51878 434 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 NLRP12P59046 1061 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 ARHGAP8P85298 464 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 SATB1Q01826 763 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 LMNB2Q03252 620 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 PON2Q15165 354 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 RSPO4Q2I0M5 234 aaPredicted RBP11.68□□□□□ -0.54
PVT1-208ENST00000519481 INTS6LQ5JSJ4 861 aaKnown RBP11.68□□□□□ -0.54
PVT1-208ENST00000519481 LAIR1Q6GTX8 287 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 PRR23BQ6ZRT6 265 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
PVT1-208ENST00000519481 TOP6BLQ8N6T0 577 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 MAB21L3Q8N8X9 362 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 LRRC3BQ96PB8 259 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 SLC46A2Q9BY10 475 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 CUEDC2Q9H467 287 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 KIAA1586Q9HCI6 787 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 GDAP2Q9NXN4 497 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 ANK1P16157 1881 aa11.68□□□□□ -0.54
PVT1-208ENST00000519481 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 SPTLC2O15270 562 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 PAPSS2O95340 614 aaPredicted RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 F11P03951 625 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 TDGF1P13385 188 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 GRSF1Q12849 480 aaKnown RBP eCLIP11.67□□□□□ -0.54
PVT1-208ENST00000519481 RUNX3Q13761 415 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 SIM2Q14190 667 aaPredicted RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 DUOXA2Q1HG44 320 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 TXNDC11Q6PKC3 985 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 C4orf50Q6ZRC1 276 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 DPH6Q7L8W6 267 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 LONP2Q86WA8 852 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 ADGRF2Q8IZF7 708 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 MTMR12Q9C0I1 747 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 PDE11AQ9HCR9 933 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 RBM12Q9NTZ6 932 aaKnown RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 TDP1Q9NUW8 608 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 TMLHEQ9NVH6 421 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 DLL3Q9NYJ7 618 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 GTF3C4Q9UKN8 822 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
PVT1-208ENST00000519481 CACNA1AO00555 2505 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 TSC2P49815 1807 aa11.67□□□□□ -0.54
PVT1-208ENST00000519481 COL4A2P08572 1712 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 NUP210Q8TEM1 1887 aaPredicted RBP11.66□□□□□ -0.54
PVT1-208ENST00000519481 A0A087X0B3 334 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 CHURC1-FNTBB4DL54 471 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 ATG13O75143 517 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 PPP6R2O75170 966 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 RETP07949 1114 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 HMGA1P17096 107 aaKnown RBP11.66□□□□□ -0.54
PVT1-208ENST00000519481 ACAT1P24752 427 aaKnown RBP11.66□□□□□ -0.54
PVT1-208ENST00000519481 CYP2F1P24903 491 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 FNTBP49356 437 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 WNT7BP56706 349 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 ASIC1P78348 528 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 TNK2Q07912 1038 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 GAS6Q14393 721 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 PDGFRLQ15198 375 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 MAPRE1Q15691 268 aaKnown RBP11.66□□□□□ -0.54
PVT1-208ENST00000519481 LPAL2Q16609 132 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 DDR2Q16832 855 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 TXNDC8Q6A555 127 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 CEP68Q76N32 757 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms