RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CAMK1Q14012 370 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 CNGA2Q16280 664 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 CFAP221Q4G0U5 840 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 SGO2Q562F6 1265 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 OSTM1Q86WC4 334 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 SLC4A11Q8NBS3 891 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 OR10T2Q8NGX3 314 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 SPPL2BQ8TCT7 592 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 KLHL5Q96PQ7 755 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 PKMYT1Q99640 499 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 HNRNPABQ99729 332 aaKnown RBP10.08□□□□□ -0.8
CLN8-203ENST00000518780 GPR88Q9GZN0 384 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 ELOVL4Q9GZR5 314 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 AFF4Q9UHB7 1163 aaKnown RBP10.08□□□□□ -0.8
CLN8-203ENST00000518780 CDY1Q9Y6F8 540 aa10.08□□□□□ -0.8
CLN8-203ENST00000518780 PDCD11Q14690 1871 aaKnown RBP10.08□□□□□ -0.8
CLN8-203ENST00000518780 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
CLN8-203ENST00000518780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.07□□□□□ -0.8
CLN8-203ENST00000518780 LRRC53A6NM62 1247 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 C2CD2LO14523 706 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 CYP26A1O43174 497 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 MFAP3LO75121 409 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 GFPT2O94808 682 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 CNPP09543 421 aaKnown RBP10.07□□□□□ -0.8
CLN8-203ENST00000518780 CPB1P15086 417 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 ATF2P15336 505 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 KLRC2P26717 231 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 GNA15P30679 374 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 CLCN1P35523 988 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 MAGEA11P43364 429 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 FXR1P51114 621 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLN8-203ENST00000518780 PDE6CP51160 858 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 SLC8A3P57103 927 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 CDK17Q00537 523 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 HABP4Q5JVS0 413 aaKnown RBP10.07□□□□□ -0.8
CLN8-203ENST00000518780 PPP1R2P3Q6NXS1 205 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 LILRA6Q6PI73 481 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 PRSS55Q6UWB4 352 aaPredicted RBP10.07□□□□□ -0.8
CLN8-203ENST00000518780 LCLAT1Q6UWP7 414 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 VSTM1Q6UX27 236 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 IRF2BP2Q7Z5L9 587 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 SPRED2Q7Z698 418 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 ACOT1Q86TX2 421 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 VPS36Q86VN1 386 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
CLN8-203ENST00000518780 CPLX3Q8WVH0 158 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 ELMO3Q96BJ8 720 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 CYFIP2Q96F07 1278 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 B3GALT6Q96L58 329 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 PANX2Q96RD6 677 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 PLEKHA4Q9H4M7 779 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 CERS4Q9HA82 394 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 PCDHB5Q9Y5E4 795 aa10.07□□□□□ -0.8
CLN8-203ENST00000518780 TRIOBPQ9H2D6 2365 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 MYBPHLA2RUH7 354 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 RNF225M0QZC1 329 aaPredicted RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 GLUD1P00367 558 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 SERPING1P05155 500 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 CD19P15391 556 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 CYP11B1P15538 503 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 ELF1P32519 619 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 SNX16P57768 344 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 RPL10AP62906 217 aaKnown RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 ROR1Q01973 937 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 ASIC2Q16515 512 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 SLC39A12Q504Y0 691 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 ZNF394Q53GI3 561 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 RSPO2Q6UXX9 243 aaPredicted RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 TRIM72Q6ZMU5 477 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 CCDC149Q6ZUS6 474 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 LRRTM3Q86VH5 581 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 TCEAL8Q8IYN2 117 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 ANKRD52Q8NB46 1076 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 GDPD5Q8WTR4 605 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 ZNF606Q8WXB4 792 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 TWNKQ96RR1 684 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 GAS2L1Q99501 681 aaPredicted RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 ZNF518BQ9C0D4 1074 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 LHX5Q9H2C1 402 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 TTYH1Q9H313 450 aaPredicted RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 NSUN3Q9H649 340 aaKnown RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 TLE6Q9H808 572 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 PNPLA8Q9NP80 782 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 CRTAC1Q9NQ79 661 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 ABHD10Q9NUJ1 306 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 HESX1Q9UBX0 185 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 AJAP1Q9UKB5 411 aaPredicted RBP10.06□□□□□ -0.8
CLN8-203ENST00000518780 PCDHGC3Q9UN70 934 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 NME7Q9Y5B8 376 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 TRIP11Q15643 1979 aa10.06□□□□□ -0.8
CLN8-203ENST00000518780 SSU72P8A0A1W2PR75 194 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 WDR27A2RRH5 827 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 EPOPA6NHQ4 379 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 HIDE1A8MVS5 230 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 O00370 1275 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms