RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PMM2O15305 246 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 LRRN2O75325 713 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 HAPLN1P10915 354 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 PTPN2P17706 415 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 FSHRP23945 695 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 CDR1P51861 262 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 EPHB3P54753 998 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 NTHL1P78549 312 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 TPD52L1Q16890 204 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 CCDC142Q17RM4 750 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 PABPC1LQ4VXU2 614 aaKnown RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 WDR44Q5JSH3 913 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 IQCEQ6IPM2 695 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 ACSF2Q96CM8 615 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 FUBP3Q96I24 572 aaKnown RBP eCLIP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 CNOT6LQ96LI5 555 aaKnown RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 ZNF512Q96ME7 567 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 THAP9Q9H5L6 903 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 CYP3A43Q9HB55 503 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 CRTAC1Q9NQ79 661 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 AVENQ9NQS1 362 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-217ENST00000518538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.48■■□□□ 1.351e-11■□□□□ 9.4
VEGFA-217ENST00000518538 VCANP13611 3396 aa23.48■■□□□ 1.35
VEGFA-217ENST00000518538 TNFRSF10AO00220 468 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 DLL1O00548 723 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 SOAT2O75908 522 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 RHOP08100 348 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 PTMSP20962 102 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 CFAP221Q4G0U5 840 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 C4orf50Q6ZRC1 276 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 SPATA2LQ8IUW3 424 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-217ENST00000518538 MYCBPAPQ8TBZ2 947 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 CORO1BQ9BR76 489 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 DNAJC25Q9H1X3 360 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 DPEP3Q9H4B8 488 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.47■■□□□ 1.354e-7■■■■■ 28.5
VEGFA-217ENST00000518538 ASB3Q9Y575 518 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 A0A0C4DFX4 3053 aa23.47■■□□□ 1.35
VEGFA-217ENST00000518538 P4HA2O15460 535 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 PTPN1P18031 435 aaKnown RBP23.46■■□□□ 1.35
VEGFA-217ENST00000518538 KCNH2Q12809 1159 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 GET4Q7L5D6 327 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-217ENST00000518538 UNC93AQ86WB7 457 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 IRF2BP1Q8IU81 584 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 ZDHHC14Q8IZN3 488 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 PLCD3Q8N3E9 789 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 B3GALNT2Q8NCR0 500 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 MYLPFQ96A32 169 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 ANO10Q9NW15 660 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 C5orf42Q9H799 3197 aa23.46■■□□□ 1.35
VEGFA-217ENST00000518538 AFPP02771 609 aaKnown RBP23.45■■□□□ 1.34
VEGFA-217ENST00000518538 ATF6P18850 670 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 CYP2F1P24903 491 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 GBP2P32456 591 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-217ENST00000518538 INCA1Q0VD86 236 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 CETN1Q12798 172 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 VEPH1Q14D04 833 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 STX1AQ16623 288 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 MDH1BQ5I0G3 518 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 CAVIN1Q6NZI2 390 aaKnown RBP23.45■■□□□ 1.34
VEGFA-217ENST00000518538 ITIH5Q86UX2 942 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 FAM114A1Q8IWE2 563 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 LEMD2Q8NC56 503 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 PSMG2Q969U7 264 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 PCED1BQ96HM7 432 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 TNIP3Q96KP6 325 aa23.45■■□□□ 1.34
VEGFA-217ENST00000518538 MAGEC2Q9UBF1 373 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-217ENST00000518538 MAGEA11P43364 429 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 NDST1P52848 882 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 EPHA5P54756 1037 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 CYP27A1Q02318 531 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 KLHL40Q2TBA0 621 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 PDZD4Q76G19 769 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-217ENST00000518538 RNF135Q8IUD6 432 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 CREBRFQ8IUR6 639 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 ITFG1Q8TB96 612 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 MYADMQ96S97 322 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 LPIN3Q9BQK8 851 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 ASAH2Q9NR71 780 aa23.44■■□□□ 1.34
VEGFA-217ENST00000518538 MRPS23Q9Y3D9 190 aaKnown RBP23.44■■□□□ 1.34
VEGFA-217ENST00000518538 ZNF197O14709 1029 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 RPL10AP62906 217 aaKnown RBP23.43■■□□□ 1.34
VEGFA-217ENST00000518538 SLC5A9Q2M3M2 681 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 PRSS36Q5K4E3 855 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 CYP4A22Q5TCH4 519 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 DNAJB7Q7Z6W7 309 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-217ENST00000518538 HS6ST3Q8IZP7 471 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 TTC39CQ8N584 583 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 ENOX1Q8TC92 643 aaKnown RBP23.43■■□□□ 1.34
VEGFA-217ENST00000518538 FAM200AQ8TCP9 573 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 TATDN2Q93075 761 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 FAM124BQ9H5Z6 455 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-217ENST00000518538 EPS15L1Q9UBC2 864 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 HMGXB4Q9UGU5 601 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 CDH7Q9ULB5 785 aa23.43■■□□□ 1.34
VEGFA-217ENST00000518538 ZFP37Q9Y6Q3 630 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-217ENST00000518538 MICAL2O94851 1124 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 VSTM1Q6UX27 236 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 ACOT1Q86TX2 421 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 TMC8Q8IU68 726 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms