RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 AUHQ13825 339 aaKnown RBP3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ABCB5Q2M3G0 1257 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 DPY19L1Q2PZI1 675 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 KIAA1614Q5VZ46 1190 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 NFRKBQ6P4R8 1299 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 KCNT2Q6UVM3 1135 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 TMC5Q6UXY8 1006 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 TPRG1Q6ZUI0 275 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 WDR5BQ86VZ2 330 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 HDDC3Q8N4P3 179 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 CNTD1Q8N815 330 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 EXD3Q8N9H8 876 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 DNAJB8Q8NHS0 232 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 FBLIM1Q8WUP2 373 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 USP7Q93009 1102 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 NXPE2Q96DL1 559 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 SORCS2Q96PQ0 1159 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ISCA1Q9BUE6 129 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ABHD16BQ9H3Z7 469 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 CRTAC1Q9NQ79 661 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 GPRC5CQ9NQ84 441 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 GFOD1Q9NXC2 390 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 TELO2Q9Y4R8 837 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 PCDHA9Q9Y5H5 950 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 UBE4BO95155 1302 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ABCA7Q8IZY2 2146 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 A0A0G2JK05 382 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 TCRBV16S1A1N1A0A5B0 115 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 E9PAM4 449 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 K7ESF4 209 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 GABRDO14764 452 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ENTPD3O75355 529 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 FRAT2O75474 233 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ASLP04424 464 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 MYL3P08590 195 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CD8BP10966 210 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CPEP16870 476 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ASPAP45381 313 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 EPHA5P54756 1037 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 SOX4Q06945 474 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 LMAN2Q12907 356 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 BNIP3Q12983 259 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PIN1Q13526 163 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 DHCR24Q15392 516 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 TESK1Q15569 626 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 LETM2Q2VYF4 491 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 SYCP2LQ5T4T6 812 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 RNF219Q5W0B1 726 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CDCA2Q69YH5 1023 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 DENND5AQ6IQ26 1287 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ABHD17CQ6PCB6 329 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ZNF852Q6ZMS4 543 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 DDX53Q86TM3 631 aaKnown RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 SLCO6A1Q86UG4 719 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ZBTB46Q86UZ6 589 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 SPATS2Q86XZ4 545 aaKnown RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 SMYD4Q8IYR2 804 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CHPFQ8IZ52 775 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 AHI1Q8N157 1196 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 MYO1HQ8N1T3 1032 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 NXPE1Q8N323 547 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 GALNT15Q8N3T1 639 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ARHGEF39Q8N4T4 335 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 FEZF2Q8TBJ5 459 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 TBC1D22AQ8WUA7 517 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 KCTD13Q8WZ19 329 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PTPRN2Q92932 1015 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 C1orf159Q96HA4 380 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 NAF1Q96HR8 494 aaKnown RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ZC3H10Q96K80 434 aaKnown RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CAMK1GQ96NX5 476 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 KCNC2Q96PR1 638 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 MPHOSPH8Q99549 860 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 TTC1Q99614 292 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PI4K2AQ9BTU6 479 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PRDM14Q9GZV8 571 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 ENTPD7Q9NQZ7 604 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CHST12Q9NRB3 414 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 EPS15L1Q9UBC2 864 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PNMA8BQ9ULN7 279 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 NDRG2Q9UN36 371 aaKnown RBP3.88□□□□□ -1.79
CPNE3-204ENST00000517862 PCDHB12Q9Y5F1 795 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 CUBNO60494 3623 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 F5P12259 2224 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 EMSYQ7Z589 1322 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 MEGF8Q7Z7M0 2845 aa3.88□□□□□ -1.79
CPNE3-204ENST00000517862 EML5Q05BV3 1969 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 HIDE1A8MVS5 230 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 H0Y8X5 98 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 PLK4O00444 970 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 SLITRK5O94991 958 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 TIAF1O95411 115 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MT-CO1P00395 513 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 ASNSP08243 561 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 PYGMP11217 842 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 PURAQ00577 322 aaKnown RBP3.87□□□□□ -1.79
CPNE3-204ENST00000517862 SCRN1Q12765 414 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms