RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 TSC2P49815 1807 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 KPNA7A9QM74 516 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 TRDMT1O14717 391 aaKnown RBP16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 DDX6P26196 483 aaKnown RBP eCLIP16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 GJB2P29033 226 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 MPLP40238 635 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 LIMK1P53667 647 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 TFAMQ00059 246 aaKnown RBP16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 GTF2BQ00403 316 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 STPG1Q5TH74 334 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 SLFN12LQ6IEE8 588 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 TCEAL6Q6IPX3 200 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 EFCAB13Q8IY85 973 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 KCNN1Q92952 543 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 TCEAL3Q969E4 200 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 CHFRQ96EP1 664 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 KIF9Q9HAQ2 790 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 TMLHEQ9NVH6 421 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 CHD8Q9HCK8 2581 aa16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 NUP210Q8TEM1 1887 aaPredicted RBP16.41■□□□□ 0.22
CSGALNACT1-204ENST00000517494 SLC26A4O43511 780 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 F11P03951 625 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 ACAT1P24752 427 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 POLR2BP30876 1174 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 ABCD1P33897 745 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 RAP1GAPP47736 663 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 GALK1P51570 392 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 GRIN1Q05586 938 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 DDR2Q16832 855 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 SFR1Q86XK3 245 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 CPA6Q8N4T0 437 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 KRI1Q8N9T8 703 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 RPLP0P6Q8NHW5 317 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 RIN3Q8TB24 985 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 LARP4BQ92615 738 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 FIZ1Q96SL8 496 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 FBRSL1Q9HCM7 1045 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 MAP1BP46821 2468 aaKnown RBP16.4■□□□□ 0.22
CSGALNACT1-204ENST00000517494 CCDC163A0A0D9SF12 145 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 DCLK1O15075 740 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CKMP06732 381 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CSH1P0DML2 217 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CSH2P0DML3 217 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 DRD1P21728 446 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 GBP1P32455 592 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 IFNAR2P48551 515 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CREB5Q02930 508 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 MTF1Q14872 753 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 PDGFRLQ15198 375 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 ELF2Q15723 593 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 NFE2Q16621 373 aaPredicted RBP16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 RNF43Q68DV7 783 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 MON1AQ86VX9 555 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 EXOC4Q96A65 974 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 FAM213AQ9BRX8 229 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 DUS2Q9NX74 493 aaKnown RBP16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 DDX43Q9NXZ2 648 aaKnown RBP16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 AGAP1Q9UPQ3 857 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 WNT6Q9Y6F9 365 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 ZFHX4Q86UP3 3567 aa16.39■□□□□ 0.21
CSGALNACT1-204ENST00000517494 SDK1Q7Z5N4 2213 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 AKAP3O75969 853 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 IL18RAPO95256 599 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 APBB3O95704 486 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 ITGB3P05106 788 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CYP2F1P24903 491 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 PMLP29590 882 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 GJA4P35212 333 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 PNPLA4P41247 253 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 RPL10AP62906 217 aaKnown RBP16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 PLK5Q496M5 336 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 SCN4BQ8IWT1 228 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CAMKK1Q8N5S9 505 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 SAAL1Q96ER3 474 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 FAM84AQ96KN4 292 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 EDEM2Q9BV94 578 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CCSER1Q9C0I3 900 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 ECT2Q9H8V3 914 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 VPS45Q9NRW7 570 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 UXTQ9UBK9 157 aaPredicted RBP16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 L1RE1Q9UN81 338 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 INVSQ9Y283 1065 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 PCDHGA5Q9Y5G8 931 aa16.38■□□□□ 0.21
CSGALNACT1-204ENST00000517494 RALGAPA1Q6GYQ0 2036 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 TRAV19A0A0A6YYK7 116 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 HUS1O60921 280 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 TADA3O75528 432 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 KRT19P08727 400 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 MYL7Q01449 175 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 FAM160A1Q05DH4 1040 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 DMC1Q14565 340 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 POSTNQ15063 836 aa16.37■□□□□ 0.21
CSGALNACT1-204ENST00000517494 CCDC142Q17RM4 750 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms