RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 MT-CO1P00395 513 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FESP07332 822 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GJB1P08034 283 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GNAI3P08754 354 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 NPSP0C0P6 89 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FAM163BP0C2L3 166 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CYP2A6P11509 494 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 PRF1P14222 555 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ITGALP20701 1170 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 MALP21145 153 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 EDNRBP24530 442 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ATP5F1P24539 256 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FPR3P25089 353 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 HOXD9P28356 352 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 IARSP41252 1262 aaKnown RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GCLCP48506 637 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 THBS3P49746 956 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ALDH5A1P51649 535 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 PDE1AP54750 535 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GYS2P54840 703 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TPTEP56180 551 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GNAI1P63096 354 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 KIF23Q02241 960 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TAP2Q03519 686 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 LAMB3Q13751 1172 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ZNF268Q14587 947 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 RAB39AQ14964 217 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ACAP2Q15057 778 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 RBMS2Q15434 407 aaKnown RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ABCB5Q2M3G0 1257 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 KRTAP27-1Q3LI81 207 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 AWAT1Q58HT5 328 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ZNF618Q5T7W0 954 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TEDDM1Q5T9Z0 273 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ANKRD16Q6P6B7 361 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TMEM108Q6UXF1 575 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DLK2Q6UY11 383 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DPY19L3Q6ZPD9 716 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 USP43Q70EL4 1123 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DDX46Q7L014 1031 aaKnown RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 PPP1R32Q7Z5V6 425 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SLC15A3Q8IY34 581 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FAM109AQ8N4B1 249 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 LRRC71Q8N4P6 559 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 AFAP1L2Q8N4X5 818 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 AOPEPQ8N6M6 819 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ZBTB8BQ8NAP8 495 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ZNF548Q8NEK5 533 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 NSMCE1Q8WV22 266 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ATG4AQ8WYN0 398 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GLG1Q92896 1179 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SCAMP4Q969E2 229 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 HDAC10Q969S8 669 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DAZAP1Q96EP5 407 aaKnown RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 VCPIP1Q96JH7 1222 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CLPTM1LQ96KA5 538 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 MARK4Q96L34 752 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 MRGPRX4Q96LA9 322 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CAMK1GQ96NX5 476 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DMRTA2Q96SC8 542 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 VRK1Q99986 396 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 EFHD1Q9BUP0 239 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CNPPD1Q9BV87 410 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 C1orf43Q9BWL3 253 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FSD1LQ9BXM9 530 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FAM126AQ9BYI3 521 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TTYH3Q9C0H2 523 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 BRD9Q9H8M2 597 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DUSP22Q9NRW4 184 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 MDFICQ9P1T7 246 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SERPINB13Q9UIV8 391 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CCNL1Q9UK58 526 aaPredicted RBP0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 LIMCH1Q9UPQ0 1083 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 IPPQ9Y573 584 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SQORQ9Y6N5 450 aa0.73□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SPATA31A3Q5VYP0 1347 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 WASHC2AQ641Q2 1341 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 A1L4Q6 167 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FAM90A10PA6NDY2 464 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 PRSS29PA6NIE9 313 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CD8B2A6NJW9 211 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FCHO1O14526 889 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ENPP3O14638 875 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 DCLK1O15075 740 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 GPR39O43194 453 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SMAD6O43541 496 aaKnown RBP0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 XPOTO43592 962 aaKnown RBP0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 SGTAO43765 313 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 BRINP1O60477 761 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TLR5O60602 858 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 ABLIM3O94929 683 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 EYA4O95677 639 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 TOMM40O96008 361 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CHEK2O96017 543 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 CRYABP02511 175 aaKnown RBP0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 FGBP02675 491 aa0.72□□□□□ -2.29
SCARNA16.5-201ENST00000517114 AHSGP02765 367 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms