RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 SLC5A2P31639 672 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TCF7P36402 384 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 SPAM1P38567 509 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 MLLT3P42568 568 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 QARSP47897 775 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 SRSF2Q01130 221 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 DMTNQ08495 405 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 RAD51AP2Q09MP3 1159 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 FCHO2Q0JRZ9 810 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TEAD4Q15561 434 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 LONRF3Q496Y0 759 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 NADK2Q4G0N4 442 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 HS1BP3Q53T59 392 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 PRR31Q5SQ13 230 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 UBAP2Q5T6F2 1119 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CDCP2Q5VXM1 449 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TWF2Q6IBS0 349 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 RCSD1Q6JBY9 416 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TCTN3Q6NUS6 607 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CC2D1AQ6P1N0 951 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 LILRA6Q6PI73 481 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ZNF517Q6ZMY9 492 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 RTL10Q7L3V2 364 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TMPRSS9Q7Z410 1059 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ADAT2Q7Z6V5 191 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 FAM228AQ86W67 206 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CEP57Q86XR8 500 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 JAMLQ86YT9 394 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 WDR63Q8IWG1 891 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CCDC146Q8IYE0 955 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 STK11IPQ8N1F8 1099 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CCDC33Q8N5R6 958 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 KCTD17Q8N5Z5 321 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 EID2Q8N6I1 236 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 LRRC17Q8N6Y2 441 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TSPYL6Q8N831 410 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 LEMD2Q8NC56 503 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 GIMAP8Q8ND71 665 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ARMC2Q8NEN0 867 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 APOBEC4Q8WW27 367 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 IGSF8Q969P0 613 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 RSPRY1Q96DX4 576 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ATXN7L3BQ96GX2 97 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ZNF419Q96HQ0 510 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 GMCL1Q96IK5 515 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 MBOAT7Q96N66 472 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TBC1D32Q96NH3 1257 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CATSPER2Q96P56 530 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TAAR1Q96RJ0 339 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 OSMRQ99650 979 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 COLEC11Q9BWP8 271 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 RANBP17Q9H2T7 1088 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 SMARCAD1Q9H4L7 1026 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 DCP1AQ9NPI6 582 aaPredicted RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ASAH2Q9NR71 780 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 ATP8A2Q9NTI2 1148 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 CROTQ9UKG9 612 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TPCN1Q9ULQ1 816 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 STX8Q9UNK0 236 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 HDAC5Q9UQL6 1122 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 STARD13Q9Y3M8 1113 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 PCDHB11Q9Y5F2 797 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 PCDHA5Q9Y5H7 936 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 PCDHA2Q9Y5H9 948 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 MTCL1Q9Y4B5 1905 aaKnown RBP2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 TENM2Q9NT68 2774 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 PCDH15Q96QU1 1955 aa2.18□□□□□ -2.06
RNU6-548P-201ENST00000517083 COL4A2P08572 1712 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 TNRC6BQ9UPQ9 1833 aaKnown RBP2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 VWA8A3KMH1 1905 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 MYH4Q9Y623 1939 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 IGHV1OR15-9A0A0B4J2B8 117 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 TCRBV21S2A2A0A5A6 115 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 H7C1Q1 480 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 KRT86O43790 486 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 OPA1O60313 960 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 PPP6R2O75170 966 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 ATP2C2O75185 946 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 TADA2AO75478 443 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 POMCP01189 267 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 ITGAVP06756 1048 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 TRIM27P14373 513 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 INSRRP14616 1297 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 CREB1P16220 341 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 DDX6P26196 483 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 VARSP26640 1264 aaKnown RBP2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 CSNK1EP49674 416 aaKnown RBP2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 RAB27AP51159 221 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 GALK1P51570 392 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 USP11P51784 963 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 METAP1P53582 386 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 SEC13P55735 322 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 CYP4A11Q02928 519 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 PPARDQ03181 441 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 TFCP2Q12800 502 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 USP4Q13107 963 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 RUNX3Q13761 415 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 DSC3Q14574 896 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 PLCB4Q15147 1175 aa2.17□□□□□ -2.06
RNU6-548P-201ENST00000517083 PSMD5Q16401 504 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms