RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 THAP7Q9BT49 309 aaPredicted RBP2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 PUS7LQ9H0K6 701 aaKnown RBP2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 DUSP22Q9NRW4 184 aa2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 GNL3LQ9NVN8 582 aaKnown RBP2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 AFG3L2Q9Y4W6 797 aa2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 PCDHGA9Q9Y5G4 932 aaKnown RBP2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 PCDHGA8Q9Y5G5 932 aa2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 PCDHGA7Q9Y5G6 932 aa2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 PCDHGA6Q9Y5G7 932 aa2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 PCDHGA3Q9Y5H0 932 aa2.91□□□□□ -1.94
SNORA40.15-201ENST00000516884 ERC2O15083 957 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 PPM1DO15297 605 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 SLC16A3O15427 465 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 TLR5O60602 858 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 PDHA1P08559 390 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 PRDX5P30044 214 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 IARSP41252 1262 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 GCLCP48506 637 aaPredicted RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 ALDH9A1P49189 494 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 POLGP54098 1239 aaPredicted RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 EEFSECP57772 596 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 PSMC1P62191 440 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 HOXA4Q00056 320 aaPredicted RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 BOP1Q14137 746 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 TRIP6Q15654 476 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 CT47A1Q5JQC4 288 aaPredicted RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 SLC30A10Q6XR72 485 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 NECAB2Q7Z6G3 386 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 TTC7BQ86TV6 843 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 RP9Q8TA86 221 aaKnown RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 RITA1Q96K30 269 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 ASB2Q96Q27 587 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 FAM126AQ9BYI3 521 aaPredicted RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 SIK2Q9H0K1 926 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 SLKQ9H2G2 1235 aaPredicted RBP2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 MAN1C1Q9NR34 630 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 SERPINB13Q9UIV8 391 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZDHHC8Q9ULC8 765 aa2.9□□□□□ -1.95
SNORA40.15-201ENST00000516884 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 LY6G6EA0A0G2JKS1 128 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 KCNU1A8MYU2 1149 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 H3BNC9 293 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 SMIM22K7EJ46 135 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 KIF20AO95235 890 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 GNAI3P08754 354 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 PPIFP30405 207 aaKnown RBP2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 CCKARP32238 428 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 CYP2C18P33260 490 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 MMP13P45452 471 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 PIK3CGP48736 1102 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZNF134P52741 427 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 GNAI1P63096 354 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 SRSF1Q07955 248 aaKnown RBP eCLIP2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 Q4G0T1 1027 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 KHDC1Q4VXA5 237 aaKnown RBP2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 PXDC1Q5TGL8 231 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 SFRP4Q6FHJ7 346 aaPredicted RBP2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 TRIM72Q6ZMU5 477 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 CNTD1Q8N815 330 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 C5orf34Q96MH7 638 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 CAMKK2Q96RR4 588 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 VRK1Q99986 396 aaPredicted RBP2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 MACROD1Q9BQ69 325 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 EBF3Q9H4W6 596 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 GABRQQ9UN88 632 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 ADAMTS5Q9UNA0 930 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 SSX2IPQ9Y2D8 614 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 RAD54BQ9Y620 910 aa2.89□□□□□ -1.95
SNORA40.15-201ENST00000516884 TLDC2A0PJX2 215 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 KLHL33A6NCF5 533 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 PRR23D1E9PI22 279 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 QSOX1O00391 747 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 SOCS2O14508 198 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 DCLK1O15075 740 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 RPLP2P05387 115 aaKnown RBP2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 PRR23D2P0DMB1 279 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 CHRM3P20309 590 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 TKTP29401 623 aaKnown RBP2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 ARHGAP25P42331 645 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 ADKP55263 362 aaKnown RBP2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 GTF2H3Q13889 308 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 RABEP1Q15276 862 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 CLUL1Q15846 466 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZNF260Q3ZCT1 412 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 MIDNQ504T8 468 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 ICE2Q659A1 982 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 KIRREL2Q6UWL6 708 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 CYP2W1Q8TAV3 490 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 DDX17Q92841 729 aaKnown RBP2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 FAXDC2Q96IV6 333 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 MARK4Q96L34 752 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 TEKT5Q96M29 485 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 C1orf43Q9BWL3 253 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 PDGFCQ9NRA1 345 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 WDR17Q8IZU2 1322 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 CNTNAP2Q9UHC6 1331 aa2.88□□□□□ -1.95
SNORA40.15-201ENST00000516884 POC1B-GALNT4F8VUJ3 575 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 ARIH2O95376 493 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 FGBP02675 491 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 CHRM5P08912 532 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms